BLASTX nr result

ID: Cimicifuga21_contig00028246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028246
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...   167   6e-64
dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]                           164   4e-62
ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-...   164   5e-62
gb|ADN33876.1| mitotic B-type cyclin [Cucumis melo subsp. melo]       164   5e-62
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   165   5e-62

>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  167 bits (424), Expect(2) = 6e-64
 Identities = 86/134 (64%), Positives = 103/134 (76%), Gaps = 7/134 (5%)
 Frame = -3

Query: 542 RKALREGSSKKKVHTYT---TVRSKAACGITSKPKELFVGFDAADVDNELAAVEYFDDLY 372
           +K  REGSSKK V T T   T RSK ACG+T+KPKE  V  DAAD  N+LAAVEY +D+Y
Sbjct: 145 KKKGREGSSKKNVKTMTSILTARSKVACGLTNKPKEQIVDIDAADAGNDLAAVEYVEDIY 204

Query: 371 KFYRIAETSCRIHDYMDSQPEFNIKMRAILVDWLIEVHNKFDLTPETLY----IIDRYLS 204
           KFY++ E+  ++HDYMDSQ E N KMRAILVDWLIEVH+KF+L PETLY    I+DR+LS
Sbjct: 205 KFYKLIESESQVHDYMDSQAEINEKMRAILVDWLIEVHHKFELMPETLYLTINIVDRFLS 264

Query: 203 TKDVLRKELQLVGM 162
            K V R+ELQLVG+
Sbjct: 265 IKTVPRRELQLVGI 278



 Score =  102 bits (253), Expect(2) = 6e-64
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = -2

Query: 174 ASRYEEIWAPEVNDFVCISDEAYT*EQVLLMEKSILGKLEWRLNVPTP*VFLVRFIKA 1
           AS+YEEIWAPEVNDFVCISD AYT +Q+L+MEK+ILGKLEW L VPTP VFLVRF+KA
Sbjct: 284 ASKYEEIWAPEVNDFVCISDRAYTHQQILMMEKAILGKLEWTLTVPTPYVFLVRFVKA 341


>dbj|BAE72070.1| Cyclin B1-2 [Daucus carota]
          Length = 456

 Score =  164 bits (414), Expect(2) = 4e-62
 Identities = 87/134 (64%), Positives = 99/134 (73%), Gaps = 7/134 (5%)
 Frame = -3

Query: 542 RKALREGSSKKKVHTYT---TVRSKAACGITSKPKELFVGFDAADVDNELAAVEYFDDLY 372
           RK   E SS K   T T   T RSKAACGI  KPKE  V  DAAD  NELAAVEY +D+Y
Sbjct: 146 RKKAIEASSSKNGQTLTSTLTARSKAACGINKKPKEQIVDIDAADATNELAAVEYVEDMY 205

Query: 371 KFYRIAETSCRIHDYMDSQPEFNIKMRAILVDWLIEVHNKFDLTPETLY----IIDRYLS 204
           KFY+ AET  ++ DYMDSQPE N KMRAILVDWLIEV NKF+L+PETLY    I+DRYL+
Sbjct: 206 KFYKEAETESQVSDYMDSQPEINQKMRAILVDWLIEVQNKFELSPETLYLTVNIVDRYLA 265

Query: 203 TKDVLRKELQLVGM 162
           TK V R+ELQL+G+
Sbjct: 266 TKMVARRELQLLGI 279



 Score = 99.8 bits (247), Expect(2) = 4e-62
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = -2

Query: 174 ASRYEEIWAPEVNDFVCISDEAYT*EQVLLMEKSILGKLEWRLNVPTP*VFLVRFIKA 1
           AS+YEEIWAPEVNDFVCISD AYT +QVL MEK +LG+LEW L VPTP VFLVRFIKA
Sbjct: 285 ASKYEEIWAPEVNDFVCISDRAYTNQQVLTMEKKVLGRLEWSLTVPTPYVFLVRFIKA 342


>ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
           gi|449529028|ref|XP_004171503.1| PREDICTED:
           G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
          Length = 455

 Score =  164 bits (414), Expect(2) = 5e-62
 Identities = 86/134 (64%), Positives = 100/134 (74%), Gaps = 7/134 (5%)
 Frame = -3

Query: 542 RKALREGSSKKKVHTYTTV---RSKAACGITSKPKELFVGFDAADVDNELAAVEYFDDLY 372
           +K   EG +KKK  T T+V   RSKAACGIT KPKE     DAADV NELAAVEY +D+Y
Sbjct: 141 KKKEGEGPAKKKAQTLTSVLTARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIY 200

Query: 371 KFYRIAETSCRIHDYMDSQPEFNIKMRAILVDWLIEVHNKFDLTPETLY----IIDRYLS 204
            FY+ AE   R HDYMDSQPE N  MRAILVDWL++VHNKF+L+PET Y    IIDR+L+
Sbjct: 201 TFYKEAENESRPHDYMDSQPEINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLA 260

Query: 203 TKDVLRKELQLVGM 162
           TK V R+ELQLVG+
Sbjct: 261 TKIVPRRELQLVGI 274



 Score = 99.4 bits (246), Expect(2) = 5e-62
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = -2

Query: 174 ASRYEEIWAPEVNDFVCISDEAYT*EQVLLMEKSILGKLEWRLNVPTP*VFLVRFIKA 1
           AS+YEEIWAPEVNDFVC+SD AYT +Q+L+MEK ILGKLEW L VPTP VFL RFIKA
Sbjct: 280 ASKYEEIWAPEVNDFVCLSDRAYTHQQILVMEKKILGKLEWTLTVPTPYVFLARFIKA 337


>gb|ADN33876.1| mitotic B-type cyclin [Cucumis melo subsp. melo]
          Length = 455

 Score =  164 bits (414), Expect(2) = 5e-62
 Identities = 86/134 (64%), Positives = 100/134 (74%), Gaps = 7/134 (5%)
 Frame = -3

Query: 542 RKALREGSSKKKVHTYTTV---RSKAACGITSKPKELFVGFDAADVDNELAAVEYFDDLY 372
           +K   EG SKKK  T T+V   RSKAACGIT KPKE     DAADV NELAAVEY +D+Y
Sbjct: 142 KKKEGEGPSKKKAQTLTSVLTARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIY 201

Query: 371 KFYRIAETSCRIHDYMDSQPEFNIKMRAILVDWLIEVHNKFDLTPETLY----IIDRYLS 204
            FY+ AE   R HDYMDSQPE N  MRAILVDWL++VHNKF+L+PET Y    IIDR+L+
Sbjct: 202 TFYKEAENESRPHDYMDSQPEINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLA 261

Query: 203 TKDVLRKELQLVGM 162
           TK V R+ELQL+G+
Sbjct: 262 TKIVPRRELQLLGI 275



 Score = 99.4 bits (246), Expect(2) = 5e-62
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = -2

Query: 174 ASRYEEIWAPEVNDFVCISDEAYT*EQVLLMEKSILGKLEWRLNVPTP*VFLVRFIKA 1
           AS+YEEIWAPEVNDFVC+SD AYT +Q+L+MEK ILGKLEW L VPTP VFL RFIKA
Sbjct: 281 ASKYEEIWAPEVNDFVCLSDRAYTHQQILVMEKKILGKLEWTLTVPTPYVFLARFIKA 338


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  165 bits (418), Expect(2) = 5e-62
 Identities = 82/126 (65%), Positives = 97/126 (76%), Gaps = 7/126 (5%)
 Frame = -3

Query: 518 SKKKVHTYT---TVRSKAACGITSKPKELFVGFDAADVDNELAAVEYFDDLYKFYRIAET 348
           SKK   T T   T RSKAACG++ KPK+  +  DAAD DNELA VEY +D+YKFY+IAE 
Sbjct: 137 SKKDAPTLTSTLTARSKAACGLSKKPKDQIIDIDAADADNELAVVEYVEDIYKFYKIAEN 196

Query: 347 SCRIHDYMDSQPEFNIKMRAILVDWLIEVHNKFDLTPETLY----IIDRYLSTKDVLRKE 180
             R+H+YMDSQPE N KMRAIL+DWLIEVH+KF+L PETLY    I+DRYL+ +  LRKE
Sbjct: 197 ESRVHNYMDSQPEINDKMRAILIDWLIEVHHKFELNPETLYLTINIVDRYLAVQTTLRKE 256

Query: 179 LQLVGM 162
           LQLVGM
Sbjct: 257 LQLVGM 262



 Score = 97.8 bits (242), Expect(2) = 5e-62
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = -2

Query: 174 ASRYEEIWAPEVNDFVCISDEAYT*EQVLLMEKSILGKLEWRLNVPTP*VFLVRFIKA 1
           AS+YEEIWAPEVNDFVCISD AY+ +QVL+MEK ILG LEW L VPTP VFLVRFIKA
Sbjct: 268 ASKYEEIWAPEVNDFVCISDRAYSHQQVLVMEKRILGGLEWNLTVPTPYVFLVRFIKA 325


Top