BLASTX nr result

ID: Cimicifuga21_contig00028242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028242
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   114   1e-23
ref|XP_002324847.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   108   1e-21
ref|XP_002309608.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   107   2e-21

>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  114 bits (285), Expect = 1e-23
 Identities = 65/131 (49%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
 Frame = -3

Query: 609 SLESSDAEXXXXXXXXXXXXXXSPYRLPYCSSTNPCYDSDSHSSDAESFCGRRYDKQSPL 430
           SL  +DA+              +PY+L +  ST P  + D   SDAESFC   Y++ + L
Sbjct: 287 SLGHNDADSVTCSVGSCSITSNNPYKLLHHFSTGPSENDDC--SDAESFCRLGYEEGNCL 344

Query: 429 L-SKEDVAEKIHKLELHAYCSTMGALYCSGPLSWDQEELVTNLRLMLHISNDEHLVVLRN 253
           L +KE++A +IH+LELHAY  T+ AL+ SGPLSW+QE LVTNLRL LHISNDEHL+ LRN
Sbjct: 345 LPTKEELAAEIHRLELHAYRCTIEALHASGPLSWEQETLVTNLRLSLHISNDEHLMELRN 404

Query: 252 LFSGETNLITS 220
           L S + ++ +S
Sbjct: 405 LVSADISIPSS 415


>ref|XP_002324847.1| predicted protein [Populus trichocarpa] gi|222866281|gb|EEF03412.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  110 bits (276), Expect = 2e-22
 Identities = 64/132 (48%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
 Frame = -3

Query: 621 FSGRSLESSDAEXXXXXXXXXXXXXXSPYRLPYCSSTNPCYDSDSHSSDAESFCGRRYDK 442
           F GRS ES+D++              SP RL  C       D+D+ SSDAESF G    +
Sbjct: 264 FCGRSSESNDSDSDACSVGSCSVNSDSPDRLFNCVVAGNSPDADTLSSDAESFYGHGDKE 323

Query: 441 QSPLLSK-EDVAEKIHKLELHAYCSTMGALYCSGPLSWDQEELVTNLRLMLHISNDEHLV 265
           ++  L   EDV  +IH LELHAY  T+G  Y SGPLSW+QE L+TNLR+ L+ISNDEHL+
Sbjct: 324 ENCSLPLGEDVTVRIHSLELHAYRCTLGVFYASGPLSWEQEALLTNLRISLNISNDEHLM 383

Query: 264 VLRNLFSGETNL 229
            LRNL S  T++
Sbjct: 384 ELRNLISAGTSI 395


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = -3

Query: 498 DSDSHSSDAESFCGRRYDKQSPLL-SKEDVAEKIHKLELHAYCSTMGALYCSGPLSWDQE 322
           D D + SDAESFC R Y++ +    + E++A ++H+LELHAY  TM ALY SGP SW+QE
Sbjct: 290 DIDGNFSDAESFCHRGYEEGTNCFPTNEELAAEVHRLELHAYRCTMEALYASGPFSWEQE 349

Query: 321 ELVTNLRLMLHISNDEHLVVLRNLFSGETNL 229
           E+VTNLRL LHISNDEHL+ +RNL S + ++
Sbjct: 350 EMVTNLRLSLHISNDEHLMEVRNLVSADNSI 380


>ref|XP_002309608.1| predicted protein [Populus trichocarpa] gi|222855584|gb|EEE93131.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  107 bits (267), Expect = 2e-21
 Identities = 62/132 (46%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
 Frame = -3

Query: 615 GRSLESSDAEXXXXXXXXXXXXXXSPYRLPYCSSTNPCYDSDSHSSDAESFCGRRYDKQS 436
           GRSLE +D++               P RL          D+D+ SSDAESF G    +++
Sbjct: 265 GRSLEPNDSDSDACSIGSCSVTSDCPNRLFNHVVAGNSPDADTLSSDAESFYGHGDGEEN 324

Query: 435 ---PLLSKEDVAEKIHKLELHAYCSTMGALYCSGPLSWDQEELVTNLRLMLHISNDEHLV 265
              PL  +EDV  ++ +LELHAY  T+GA Y SGPLSW+QE L+TNLR+ L+ISNDEHL+
Sbjct: 325 CSFPL--EEDVTARVRRLELHAYRCTLGAFYASGPLSWEQEALLTNLRISLNISNDEHLM 382

Query: 264 VLRNLFSGETNL 229
            LRNL S ET++
Sbjct: 383 ELRNLISAETSI 394


>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  107 bits (266), Expect = 2e-21
 Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
 Frame = -3

Query: 624 CFSGRSLESSDAEXXXXXXXXXXXXXXSPYRLPYCSSTNPCYDSDSHSSDAESFCGRRYD 445
           C  G + ES+ A+              +  +L +  S  P  D DS  SDAES C +R D
Sbjct: 269 CSFGENRESNHADSITCSVGSCSITSRNSCKLQFPVSAGPFDDVDSSFSDAESVC-QRSD 327

Query: 444 KQSPLL--SKEDVAEKIHKLELHAYCSTMGALYCSGPLSWDQEELVTNLRLMLHISNDEH 271
           ++      ++E++A +IH+LELHAY  T+ AL+ SGPLSW+QE L+TNLRL LHISNDEH
Sbjct: 328 EEGDCSPPTQEELAAEIHRLELHAYRCTIEALHASGPLSWEQEALMTNLRLSLHISNDEH 387

Query: 270 LVVLRNLFSGETNL 229
           L+ LRNL S E ++
Sbjct: 388 LMELRNLISSENSI 401


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