BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028237
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...    89   4e-16
ref|XP_003594059.1| Baculoviral IAP repeat-containing protein [M...    84   2e-14
ref|XP_004159841.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ...    83   2e-14
ref|XP_004134170.1| PREDICTED: putative E3 ubiquitin-protein lig...    83   2e-14
ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...    83   2e-14

>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
            vinifera]
          Length = 893

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
 Frame = -3

Query: 338  KHRAQIETSAKLEEDRKRAKSVNDLWRRKDDIQNLEIQIAQLRFNADPLKMASLHWGTDG 159
            K R QIE SAK +ED  + K+  +L + KDDIQ LE QI++LR   D  K+A+L  G DG
Sbjct: 735  KEREQIEVSAKSKEDMIKLKAEANLQKYKDDIQKLEKQISELRLKTDSSKIAALRRGIDG 794

Query: 158  SSASSLTDAGSAQAFYGTHQNSYISKLNAVFQDNLES-NVKRERECVMCLTEE 3
            S AS LTD  +  A +   Q  +IS++   F +   S  VKRERECVMCL+EE
Sbjct: 795  SYASRLTDTINGSA-HKESQAPFISEMVTNFHNYAGSGGVKRERECVMCLSEE 846


>ref|XP_003594059.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
            gi|355483107|gb|AES64310.1| Baculoviral IAP
            repeat-containing protein [Medicago truncatula]
          Length = 929

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
 Frame = -3

Query: 338  KHRAQIETSAKLEEDRKRAKSVNDLWRRKDDIQNLEIQIAQLRFNADPLKMASLHWGTDG 159
            K R QIE  A+ +E+R + ++  +L R KDDIQ LE +IAQ+R  +D  K+A+L  G DG
Sbjct: 770  KEREQIEELARTKEERIKLEAEKELRRYKDDIQKLEKEIAQIRQKSDSSKIAALKRGIDG 829

Query: 158  SSASSLTDAGSAQAFYGTHQNS---YISKLNAVFQDNLESNVKRERECVMCLTEE 3
            S A S  D      F   H  S    + KLN    +     VKRERECVMCL+EE
Sbjct: 830  SYAGSFKDTKKGSGFEEPHTASISELVQKLNNFSMNG--GGVKRERECVMCLSEE 882


>ref|XP_004159841.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
            RF298-like [Cucumis sativus]
          Length = 901

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/112 (41%), Positives = 67/112 (59%)
 Frame = -3

Query: 338  KHRAQIETSAKLEEDRKRAKSVNDLWRRKDDIQNLEIQIAQLRFNADPLKMASLHWGTDG 159
            K R QIE S K++ED  + K+ N+L + KDDIQ LE +I+ LR   D  ++A+L  G DG
Sbjct: 743  KEREQIEDSVKVKEDTIKLKAENNLIKYKDDIQKLEKEISVLRLKTDSSRIAALKRGIDG 802

Query: 158  SSASSLTDAGSAQAFYGTHQNSYISKLNAVFQDNLESNVKRERECVMCLTEE 3
            S AS LTD  +      +   +    +  +++ +    VKRERECVMCL+EE
Sbjct: 803  SYASRLTDTRNNTDHKESWSPNVSESMKDLYKYSGTGGVKRERECVMCLSEE 854


>ref|XP_004134170.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Cucumis
            sativus]
          Length = 901

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/112 (41%), Positives = 67/112 (59%)
 Frame = -3

Query: 338  KHRAQIETSAKLEEDRKRAKSVNDLWRRKDDIQNLEIQIAQLRFNADPLKMASLHWGTDG 159
            K R QIE S K++ED  + K+ N+L + KDDIQ LE +I+ LR   D  ++A+L  G DG
Sbjct: 743  KEREQIEDSVKVKEDTIKLKAENNLIKYKDDIQKLEKEISVLRLKTDSSRIAALKRGIDG 802

Query: 158  SSASSLTDAGSAQAFYGTHQNSYISKLNAVFQDNLESNVKRERECVMCLTEE 3
            S AS LTD  +      +   +    +  +++ +    VKRERECVMCL+EE
Sbjct: 803  SYASRLTDTRNNTDHKESWSPNVSESMKDLYKYSGTGGVKRERECVMCLSEE 854


>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 883

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
 Frame = -3

Query: 338  KHRAQIETSAKLEEDRKRAKSVNDLWRRKDDIQNLEIQIAQLRFNADPLKMASLHWGTDG 159
            K R QIE SAK +ED  + K+  +L R +DDIQ LE +IAQLR   D  K+A+L  G DG
Sbjct: 726  KEREQIEESAKSKEDMIKLKAEENLHRYRDDIQKLEKEIAQLRQKTDSSKIAALRRGIDG 785

Query: 158  SSASSLTDAGS--AQAFYGTHQNSYISKLNAVFQDNLESNVKRERECVMCLTEE 3
            +  SS  D  S   +    T  +  +S LN     +L   VKRERECVMCL+EE
Sbjct: 786  NYVSSFMDVKSMALKESRATFISEMVSNLN---DYSLIGGVKRERECVMCLSEE 836