BLASTX nr result

ID: Cimicifuga21_contig00028224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028224
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38700.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002264721.1| PREDICTED: 3-ketoacyl-CoA synthase 1-like [V...   174   7e-42
gb|AAC99312.1| fatty acid elongase 3-ketoacyl-CoA synthase 1 [Ar...   171   4e-41
ref|NP_171620.2| 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana...   171   4e-41
dbj|BAH20305.1| AT1G01120 [Arabidopsis thaliana]                      171   4e-41

>emb|CBI38700.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/96 (87%), Positives = 90/96 (93%)
 Frame = -2

Query: 290 GITSTPPNLCMKEARAEAEAVMFGALDSLFEKTGIRPRDVGVLIVNCSLFNPTPSLSAMI 111
           GITS PPNLCMKEARAEAEAVMFGALDSLF KTG++P D+G+LIVNCSLFNPTPSLSAMI
Sbjct: 219 GITSRPPNLCMKEARAEAEAVMFGALDSLFSKTGVKPSDIGILIVNCSLFNPTPSLSAMI 278

Query: 110 VNHYKMRGDIKSFNLGGMGCSAGLISIDLAKDLLKA 3
           VNHYK+R DI S+NLGGMGCSAGLISIDLAK LLKA
Sbjct: 279 VNHYKLRTDISSYNLGGMGCSAGLISIDLAKHLLKA 314


>ref|XP_002264721.1| PREDICTED: 3-ketoacyl-CoA synthase 1-like [Vitis vinifera]
          Length = 530

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/96 (87%), Positives = 90/96 (93%)
 Frame = -2

Query: 290 GITSTPPNLCMKEARAEAEAVMFGALDSLFEKTGIRPRDVGVLIVNCSLFNPTPSLSAMI 111
           GITS PPNLCMKEARAEAEAVMFGALDSLF KTG++P D+G+LIVNCSLFNPTPSLSAMI
Sbjct: 176 GITSRPPNLCMKEARAEAEAVMFGALDSLFSKTGVKPSDIGILIVNCSLFNPTPSLSAMI 235

Query: 110 VNHYKMRGDIKSFNLGGMGCSAGLISIDLAKDLLKA 3
           VNHYK+R DI S+NLGGMGCSAGLISIDLAK LLKA
Sbjct: 236 VNHYKLRTDISSYNLGGMGCSAGLISIDLAKHLLKA 271


>gb|AAC99312.1| fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis
           thaliana]
          Length = 520

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/97 (87%), Positives = 91/97 (93%)
 Frame = -2

Query: 293 KGITSTPPNLCMKEARAEAEAVMFGALDSLFEKTGIRPRDVGVLIVNCSLFNPTPSLSAM 114
           +GITSTPP L M EARAEAEAVMFGALDSLFEKTGI+P +VG+LIVNCSLFNPTPSLSAM
Sbjct: 170 RGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAM 229

Query: 113 IVNHYKMRGDIKSFNLGGMGCSAGLISIDLAKDLLKA 3
           IVNHYKMR DIKS+NLGGMGCSAGLISIDLA +LLKA
Sbjct: 230 IVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKA 266


>ref|NP_171620.2| 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
           gi|75192344|sp|Q9MAM3.1|KCS1_ARATH RecName:
           Full=3-ketoacyl-CoA synthase 1; Short=KCS-1; AltName:
           Full=Very long-chain fatty acid condensing enzyme 1;
           Short=VLCFA condensing enzyme 1
           gi|6715643|gb|AAF26470.1|AC007323_11 T25K16.11
           [Arabidopsis thaliana] gi|18377664|gb|AAL66982.1|
           putative fatty acid elongase 3-ketoacyl-CoA synthase 1
           [Arabidopsis thaliana] gi|20465993|gb|AAM20218.1|
           putative fatty acid elongase 3-ketoacyl-CoA synthase 1
           [Arabidopsis thaliana] gi|332189120|gb|AEE27241.1|
           3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
          Length = 528

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/97 (87%), Positives = 91/97 (93%)
 Frame = -2

Query: 293 KGITSTPPNLCMKEARAEAEAVMFGALDSLFEKTGIRPRDVGVLIVNCSLFNPTPSLSAM 114
           +GITSTPP L M EARAEAEAVMFGALDSLFEKTGI+P +VG+LIVNCSLFNPTPSLSAM
Sbjct: 178 RGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAM 237

Query: 113 IVNHYKMRGDIKSFNLGGMGCSAGLISIDLAKDLLKA 3
           IVNHYKMR DIKS+NLGGMGCSAGLISIDLA +LLKA
Sbjct: 238 IVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKA 274


>dbj|BAH20305.1| AT1G01120 [Arabidopsis thaliana]
          Length = 391

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/97 (87%), Positives = 91/97 (93%)
 Frame = -2

Query: 293 KGITSTPPNLCMKEARAEAEAVMFGALDSLFEKTGIRPRDVGVLIVNCSLFNPTPSLSAM 114
           +GITSTPP L M EARAEAEAVMFGALDSLFEKTGI+P +VG+LIVNCSLFNPTPSLSAM
Sbjct: 41  RGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAM 100

Query: 113 IVNHYKMRGDIKSFNLGGMGCSAGLISIDLAKDLLKA 3
           IVNHYKMR DIKS+NLGGMGCSAGLISIDLA +LLKA
Sbjct: 101 IVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKA 137


Top