BLASTX nr result

ID: Cimicifuga21_contig00028220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028220
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich...   143   1e-32
ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycin...   133   1e-29
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...   128   6e-28
ref|XP_003544784.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   127   7e-28

>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/103 (66%), Positives = 81/103 (78%)
 Frame = -3

Query: 321 RLHQNFSKLFGKYSENEIPFKELVEELMKDKVKADKSKLPNICCPDWEFNLSSIFVQVDT 142
           RL  N   L GKY E+EIP KE++E+LM+DKVKADKS+LP IC  DWEFNLSSIFV++DT
Sbjct: 157 RLGLNLKDLLGKYGESEIPVKEVLEKLMRDKVKADKSRLPGICSIDWEFNLSSIFVEIDT 216

Query: 141 PLGCYGTRSTIALYVKTTGEVNFYEKYLVDEKWKEHTVNYQIK 13
           PLGCYGTRST AL +   GEV+FYE YL    WKE TVNY+I+
Sbjct: 217 PLGCYGTRSTAALTIGAGGEVSFYEIYLEKNVWKESTVNYRIQ 259


>ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich protein T10 in DGCR
           region-like [Glycine max]
          Length = 275

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/102 (64%), Positives = 80/102 (78%)
 Frame = -3

Query: 321 RLHQNFSKLFGKYSENEIPFKELVEELMKDKVKADKSKLPNICCPDWEFNLSSIFVQVDT 142
           RL  +F +   KY E EIP KE++++LMKDKVKADKS LP IC PDWEFNLSSIFV+V+T
Sbjct: 161 RLEFSFKEHVAKYGEGEIPVKEVIQKLMKDKVKADKSSLPRICSPDWEFNLSSIFVEVET 220

Query: 141 PLGCYGTRSTIALYVKTTGEVNFYEKYLVDEKWKEHTVNYQI 16
           PLG YGTRS+ AL V++ GE NFYE YL D KWKEH +++ I
Sbjct: 221 PLGLYGTRSSAALTVRSRGEANFYEVYLDDTKWKEHAIDFHI 262


>ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycine max]
           gi|255635670|gb|ACU18184.1| unknown [Glycine max]
          Length = 273

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/102 (59%), Positives = 80/102 (78%)
 Frame = -3

Query: 321 RLHQNFSKLFGKYSENEIPFKELVEELMKDKVKADKSKLPNICCPDWEFNLSSIFVQVDT 142
           RL  +F +   K+ E EIP KE++++LMKD VKADK+ LP IC  DWEFNLSSIFV+V+T
Sbjct: 161 RLEFSFKEHVAKHGEGEIPVKEVIQKLMKDTVKADKNSLPRICSLDWEFNLSSIFVEVET 220

Query: 141 PLGCYGTRSTIALYVKTTGEVNFYEKYLVDEKWKEHTVNYQI 16
           PLG YGTRS+ AL V+++GE +FYE YL D KWKEH ++++I
Sbjct: 221 PLGLYGTRSSAALTVRSSGEASFYEVYLDDTKWKEHVIDFRI 262


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/107 (59%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -3

Query: 321 RLHQNFSKLFGKYS-ENEIPFKELVEELMKDKVKADKSKLPNICCPDWEFNLSSIFVQVD 145
           RL  NF +    Y  E+EIP + ++E+LM+D V+A+KS LP IC  DWE NLSSIFV+V 
Sbjct: 140 RLKLNFKEQLDTYGGEDEIPVEGMLEKLMRDTVRAEKSGLPGICSLDWEHNLSSIFVEVH 199

Query: 144 TPLGCYGTRSTIALYVKTTGEVNFYEKYLVDEKWKEHTVNYQIKNAK 4
           TPLGCYGTRST AL V+  GEV+FYE YL D  WKE TVNY+I  A+
Sbjct: 200 TPLGCYGTRSTTALTVRANGEVSFYETYLEDNIWKEKTVNYRILKAE 246


>ref|XP_003544784.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Glycine
           max]
          Length = 270

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/103 (58%), Positives = 76/103 (73%)
 Frame = -3

Query: 321 RLHQNFSKLFGKYSENEIPFKELVEELMKDKVKADKSKLPNICCPDWEFNLSSIFVQVDT 142
           RL   F +   KY E EIP KE+V +LMKDK KAD S LP+IC  DWEFNLSSIFV+V+T
Sbjct: 161 RLEVGFKEQLAKYGEGEIPVKEVVHKLMKDKTKADNSHLPHICSLDWEFNLSSIFVEVET 220

Query: 141 PLGCYGTRSTIALYVKTTGEVNFYEKYLVDEKWKEHTVNYQIK 13
           PLG YGTRS+ AL V ++ EV+F+E YL +  WKEH +++ I+
Sbjct: 221 PLGLYGTRSSAALIVTSSEEVSFFEAYLDEGMWKEHLIDFHIQ 263


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