BLASTX nr result

ID: Cimicifuga21_contig00028212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028212
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37462.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]   179   2e-43
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38
ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  179 bits (455), Expect = 2e-43
 Identities = 82/98 (83%), Positives = 90/98 (91%)
 Frame = -3

Query: 296 SVHTFNMLITMYFELGEPDGAFETWHEMDTRGCARDTDTYCVMIEGLFGCDKTEGACSLL 117
           SVHTFNMLI+M+FE+GEPDGAFETWHEMD RGCARDTDTYCVMIEGLF C+K E AC LL
Sbjct: 550 SVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLL 609

Query: 116 QEVVNKGMKLPYRKFDVFLMKLSALGDLQAIHRLSEHM 3
            EVVNKG+KLPYRKFD FLM+LS +GDLQAIH+LSEHM
Sbjct: 610 DEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 647


>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score =  179 bits (455), Expect = 2e-43
 Identities = 82/98 (83%), Positives = 90/98 (91%)
 Frame = -3

Query: 296 SVHTFNMLITMYFELGEPDGAFETWHEMDTRGCARDTDTYCVMIEGLFGCDKTEGACSLL 117
           SVHTFNMLI+M+FE+GEPDGAFETWHEMD RGCARDTDTYCVMIEGLF C+K E AC LL
Sbjct: 586 SVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLL 645

Query: 116 QEVVNKGMKLPYRKFDVFLMKLSALGDLQAIHRLSEHM 3
            EVVNKG+KLPYRKFD FLM+LS +GDLQAIH+LSEHM
Sbjct: 646 DEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 683


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score =  179 bits (454), Expect = 2e-43
 Identities = 81/98 (82%), Positives = 90/98 (91%)
 Frame = -3

Query: 296 SVHTFNMLITMYFELGEPDGAFETWHEMDTRGCARDTDTYCVMIEGLFGCDKTEGACSLL 117
           SVHTFNMLI+M+FE+GEPDGAFETWHEMD RGCARDTDTYCVMIEGLF C+K E AC LL
Sbjct: 559 SVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLL 618

Query: 116 QEVVNKGMKLPYRKFDVFLMKLSALGDLQAIHRLSEHM 3
            EV+NKG+KLPYRKFD FLM+LS +GDLQAIH+LSEHM
Sbjct: 619 DEVINKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 656


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/98 (73%), Positives = 86/98 (87%)
 Frame = -3

Query: 296 SVHTFNMLITMYFELGEPDGAFETWHEMDTRGCARDTDTYCVMIEGLFGCDKTEGACSLL 117
           SV T+NMLI+M+FE+ +PDGAFETW E+D RGC  DTDTYCVMIEGLF C+K E AC LL
Sbjct: 343 SVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLL 402

Query: 116 QEVVNKGMKLPYRKFDVFLMKLSALGDLQAIHRLSEHM 3
           +EV+N+G+KLPY+KFD FLM+LS +GDLQAIHRLSEHM
Sbjct: 403 EEVINEGVKLPYKKFDSFLMQLSVIGDLQAIHRLSEHM 440


>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/98 (71%), Positives = 88/98 (89%)
 Frame = -3

Query: 296 SVHTFNMLITMYFELGEPDGAFETWHEMDTRGCARDTDTYCVMIEGLFGCDKTEGACSLL 117
           SV T NMLI+M+FE+G+PDGAFETW+EMD RGCA+D DTY VMI+GLFGC+K E AC L+
Sbjct: 349 SVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLI 408

Query: 116 QEVVNKGMKLPYRKFDVFLMKLSALGDLQAIHRLSEHM 3
           +++VNKGMKLPY+KFD FLM+LS +G+++AIHRLSEHM
Sbjct: 409 EDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHRLSEHM 446


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