BLASTX nr result

ID: Cimicifuga21_contig00028204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028204
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281967.1| PREDICTED: probable lipoate-protein ligase A...    98   8e-19
ref|XP_002531849.1| lipoate-protein ligase, putative [Ricinus co...    97   1e-18
ref|NP_189543.2| biotin/lipoate A/B protein ligase family protei...    96   2e-18
ref|XP_002875485.1| predicted protein [Arabidopsis lyrata subsp....    95   7e-18
emb|CAN79982.1| hypothetical protein VITISV_038033 [Vitis vinifera]    94   9e-18

>ref|XP_002281967.1| PREDICTED: probable lipoate-protein ligase A [Vitis vinifera]
           gi|297733965|emb|CBI15212.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/60 (76%), Positives = 51/60 (85%)
 Frame = -2

Query: 199 MTISQASKIGLPLMNLVRTQGIPILQQLHLEEKLLRTSLDNWCIINDGTNAPTIVMGTSG 20
           MTISQ   +GLPLM LVR +G+PILQQLHLEE+LLRTS +NWCIINDG N PTIVMG SG
Sbjct: 1   MTISQTRNVGLPLMKLVRWKGVPILQQLHLEEQLLRTSSENWCIINDGANDPTIVMGISG 60


>ref|XP_002531849.1| lipoate-protein ligase, putative [Ricinus communis]
           gi|223528499|gb|EEF30527.1| lipoate-protein ligase,
           putative [Ricinus communis]
          Length = 267

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = -2

Query: 193 ISQASKIGLPLMNLVRTQGIPILQQLHLEEKLLRTSLDNWCIINDGTNAPTIVMGTSG 20
           I QA+K+GLPLMNLVR  G+PIL+QL LEEKLLRTS DNWCIINDGTN P IVMG SG
Sbjct: 4   IRQATKLGLPLMNLVRFNGVPILKQLQLEEKLLRTSSDNWCIINDGTNVPNIVMGISG 61


>ref|NP_189543.2| biotin/lipoate A/B protein ligase family protein [Arabidopsis
           thaliana] gi|7939551|dbj|BAA95754.1| lipoate protein
           ligase-like protein [Arabidopsis thaliana]
           gi|332643999|gb|AEE77520.1| biotin/lipoate A/B protein
           ligase family protein [Arabidopsis thaliana]
          Length = 262

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/60 (73%), Positives = 52/60 (86%)
 Frame = -2

Query: 199 MTISQASKIGLPLMNLVRTQGIPILQQLHLEEKLLRTSLDNWCIINDGTNAPTIVMGTSG 20
           M++S+A  + LPLMNLVR +G PIL+QLHLEE+LLRTS DNWCI+NDGTN PTIVMG SG
Sbjct: 1   MSLSRAKDLRLPLMNLVRLKGTPILEQLHLEERLLRTSSDNWCIVNDGTNVPTIVMGMSG 60


>ref|XP_002875485.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321323|gb|EFH51744.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = -2

Query: 199 MTISQASKIGLPLMNLVRTQGIPILQQLHLEEKLLRTSLDNWCIINDGTNAPTIVMGTSG 20
           M++S+   + LPLMNLVR +G PIL+QLHLEE+LLRTS DNWCI+NDGTN PTIVMG SG
Sbjct: 1   MSLSRVKDLRLPLMNLVRLKGTPILEQLHLEERLLRTSSDNWCIVNDGTNVPTIVMGMSG 60


>emb|CAN79982.1| hypothetical protein VITISV_038033 [Vitis vinifera]
          Length = 296

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = -2

Query: 199 MTISQASKIGLPLMNLVRTQGIPILQQLHLEEKLLRTSLDNWCIINDGTNAPTIVMG 29
           MTISQ   +GLPLM LVR +G+PILQQLHLEE+LLRTS +NWCIINDG N PTIVMG
Sbjct: 1   MTISQTRNVGLPLMKLVRWKGVPILQQLHLEEQLLRTSSENWCIINDGANDPTIVMG 57


Top