BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028201
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           106   2e-21
gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Jap...    99   4e-19
gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza...    99   4e-19
ref|XP_002321312.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    96   4e-18

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%)
 Frame = +3

Query: 81  TIRIPGMIKRRPITVLIDTGSTHSFLDTEVACQVRCKMEPTAHMLVTVANGERTISKAIC 260
           T+R+ G +K R I +LID+GSTH+FLD  VA ++ C  E    + VTVA+G + IS + C
Sbjct: 11  TMRLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSSTC 70

Query: 261 NQLKWEMQGHQFEADIRLLPLGGCDMVLGGDWLKQCG 371
              KW+MQG +F+A++ LLPL GCDMVLG  WLKQ G
Sbjct: 71  RAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLG 107


>gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
           gi|108711868|gb|ABF99663.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1087

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
 Frame = +3

Query: 6   DELLQEVETGMEIS-------LHALTGNVGTNTIRIPGMIKRRPITVLIDTGSTHSFLDT 164
           DELL  V TG+E+S       LHAL G   TN +++  +   + + VL+D+GS+HSF+++
Sbjct: 381 DELLDAV-TGLELSEDSANLSLHALAGTSHTNIVQLRALSSNQVLIVLVDSGSSHSFINS 439

Query: 165 EVACQVRCKMEPTAHMLVTVANGERTISKAICNQLKWEMQGHQFEADIRLLPLGGCDMVL 344
            +  ++    EP     V VANGE  +  A  +Q  W +QGHQF   +R+LP+GG D+VL
Sbjct: 440 ALCHRLHLLSEPIPPTSVRVANGEVLVCDAKISQFDWWVQGHQFSFPVRVLPMGGYDLVL 499

Query: 345 GGDWLKQ 365
           G DWL Q
Sbjct: 500 GMDWLTQ 506


>gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
          Length = 799

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
 Frame = +3

Query: 6   DELLQEVETGMEIS-------LHALTGNVGTNTIRIPGMIKRRPITVLIDTGSTHSFLDT 164
           DELL  V TG+E+S       LHAL G   TN +++  +   + + VL+D+GS+HSF+++
Sbjct: 93  DELLDAV-TGLELSEDSANLSLHALAGTSHTNIVQLRALSSNQVLIVLVDSGSSHSFINS 151

Query: 165 EVACQVRCKMEPTAHMLVTVANGERTISKAICNQLKWEMQGHQFEADIRLLPLGGCDMVL 344
            +  ++    EP     V VANGE  +  A  +Q  W +QGHQF   +R+LP+GG D+VL
Sbjct: 152 ALCHRLHLLSEPIPPTSVRVANGEVLVCDAKISQFDWWVQGHQFSFPVRVLPMGGYDLVL 211

Query: 345 GGDWLKQ 365
           G DWL Q
Sbjct: 212 GMDWLTQ 218


>ref|XP_002321312.1| predicted protein [Populus trichocarpa] gi|222862085|gb|EEE99627.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/106 (42%), Positives = 69/106 (65%)
 Frame = +3

Query: 42  ISLHALTGNVGTNTIRIPGMIKRRPITVLIDTGSTHSFLDTEVACQVRCKMEPTAHMLVT 221
           +SL+AL  N   NTIRI G    R + +LID+GSTH+F+D  +A +++  +E +  + VT
Sbjct: 266 LSLNALADNYAHNTIRIRGNYHGRELVILIDSGSTHNFIDEHIAGELQISIERSLVLTVT 325

Query: 222 VANGERTISKAICNQLKWEMQGHQFEADIRLLPLGGCDMVLGGDWL 359
           +ANG   +  +   + KW MQ ++F  D+++L LG CD+VLG DWL
Sbjct: 326 IANGSTILCDSYTTEFKWFMQNYEFVVDLKILKLGRCDVVLGMDWL 371


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/121 (39%), Positives = 75/121 (61%)
 Frame = +3

Query: 9   ELLQEVETGMEISLHALTGNVGTNTIRIPGMIKRRPITVLIDTGSTHSFLDTEVACQVRC 188
           E L E +  +++SL+AL  N  + T+ + G  K R + VLID+GS+H+FL ++VA +V C
Sbjct: 360 EGLXEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSHNFLSSKVAKRVDC 419

Query: 189 KMEPTAHMLVTVANGERTISKAICNQLKWEMQGHQFEADIRLLPLGGCDMVLGGDWLKQC 368
             +    + VTVANG+     A+C+  +W MQG +F A++ +LPL   D++LG  WL   
Sbjct: 420 CWQKARGIRVTVANGQELHCTALCSDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLATL 479

Query: 369 G 371
           G
Sbjct: 480 G 480