BLASTX nr result

ID: Cimicifuga21_contig00028182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028182
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622209.1| Double-strand-break repair protein rad21-lik...    94   1e-17
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    92   3e-17
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    90   2e-16
ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810...    89   5e-16

>ref|XP_003622209.1| Double-strand-break repair protein rad21-like protein [Medicago
            truncatula] gi|355497224|gb|AES78427.1|
            Double-strand-break repair protein rad21-like protein
            [Medicago truncatula]
          Length = 853

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/100 (47%), Positives = 68/100 (68%)
 Frame = +1

Query: 4    NLTDEELRPREEDNNEERSGWSVRTKKVANFLCKSFVKQRKRSHTDVLNLRPIMDGRTRK 183
            ++T +E+ P + +N++  SGWS RT+KVA++L KSF    K+  +  +NL  +  GRTRK
Sbjct: 752  HITVQEMNPSDTENSK-MSGWSERTRKVASYLSKSFQDAGKQKESGSVNLSQVSQGRTRK 810

Query: 184  ESARLFYEVLFLKSRGFVDVKQDTPYGDICLLSTPALMAT 303
            ESARLFYE+L LK+  +VDV+Q+  YGDI +   P L  T
Sbjct: 811  ESARLFYEILVLKTTNYVDVQQNEAYGDIAVKKLPKLDKT 850


>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/90 (50%), Positives = 64/90 (71%)
 Frame = +1

Query: 1   LNLTDEELRPREEDNNEERSGWSVRTKKVANFLCKSFVKQRKRSHTDVLNLRPIMDGRTR 180
           LN+ +EE+   E DN + + GWS RT+     L +SF+KQ+ R   +V+NL  +++GR +
Sbjct: 665 LNMMNEEISSDEGDN-QNQYGWSGRTRVAVRCLHRSFLKQKNRREEEVVNLLSLLEGRAK 723

Query: 181 KESARLFYEVLFLKSRGFVDVKQDTPYGDI 270
           KESARLFYE+L LKS+G+V VKQ+  YGDI
Sbjct: 724 KESARLFYEILVLKSKGYVHVKQENAYGDI 753


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/93 (46%), Positives = 66/93 (70%)
 Frame = +1

Query: 7   LTDEELRPREEDNNEERSGWSVRTKKVANFLCKSFVKQRKRSHTDVLNLRPIMDGRTRKE 186
           L +EE+   E  N ++ +GWS RT  VA +LC+SF+ Q+K+   + + L   + G+T+KE
Sbjct: 516 LMNEEINSCEVAN-QKINGWSDRTGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKKE 574

Query: 187 SARLFYEVLFLKSRGFVDVKQDTPYGDICLLST 285
           S+RLFYE+L LKS+G+VDV+Q+  YGDI ++ T
Sbjct: 575 SSRLFYEILVLKSKGYVDVEQNNAYGDIRVMKT 607


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/93 (46%), Positives = 66/93 (70%)
 Frame = +1

Query: 7   LTDEELRPREEDNNEERSGWSVRTKKVANFLCKSFVKQRKRSHTDVLNLRPIMDGRTRKE 186
           L +EE+   E  N ++ +GWS RT  VA +LC+SF+ Q+K+   + + L   + G+T+KE
Sbjct: 651 LMNEEINSCEVAN-QKINGWSDRTGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKKE 709

Query: 187 SARLFYEVLFLKSRGFVDVKQDTPYGDICLLST 285
           S+RLFYE+L LKS+G+VDV+Q+  YGDI ++ T
Sbjct: 710 SSRLFYEILVLKSKGYVDVEQNNAYGDIRVMKT 742


>ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810733 [Glycine max]
          Length = 882

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/100 (48%), Positives = 64/100 (64%)
 Frame = +1

Query: 4   NLTDEELRPREEDNNEERSGWSVRTKKVANFLCKSFVKQRKRSHTDVLNLRPIMDGRTRK 183
           NL DEE   R  + +E  +GWS RT++VA+ L +SF+  RK+   D +N   +  GR RK
Sbjct: 395 NLMDEETNSRGTNESELLAGWSGRTREVASCLHQSFLHARKQRE-DTVNFSQVFGGRARK 453

Query: 184 ESARLFYEVLFLKSRGFVDVKQDTPYGDICLLSTPALMAT 303
           ESA LFYEVL LK+ G+VDV+Q+  YGDI +   P L  T
Sbjct: 454 ESALLFYEVLVLKTTGYVDVEQNKAYGDIAISRLPKLDQT 493


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