BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028170
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21248.3| unnamed protein product [Vitis vinifera]              436   e-120
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   436   e-120
ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   434   e-120
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab...   426   e-117
ref|XP_003548486.1| PREDICTED: transcription-repair-coupling fac...   425   e-117

>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  436 bits (1121), Expect = e-120
 Identities = 215/242 (88%), Positives = 231/242 (95%)
 Frame = +1

Query: 1    VFYVLPRIKGLEEVKEFLEQSFPNLDTAIAHGKQYSKQLEETMENFAQGETKILICTNIV 180
            +FYVLPRIKGLEEV EFLE SFP+++ AIAHGKQYSKQLEETM+ FAQGE KILICTNIV
Sbjct: 300  IFYVLPRIKGLEEVMEFLECSFPDVEIAIAHGKQYSKQLEETMDRFAQGEIKILICTNIV 359

Query: 181  ESGLDIQDANTIIIQDVHQFGLAQLYQLRGRVGRADKEAHAHLFYPEKSLLSDQALERLT 360
            ESGLDIQ+ANTIIIQ+V QFGLAQLYQLRGRVGRADKEAHA+LFYP+KSLLSDQALERL+
Sbjct: 360  ESGLDIQNANTIIIQEVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLS 419

Query: 361  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVGDHRL 540
            ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKV +HRL
Sbjct: 420  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRL 479

Query: 541  ISAPYHTVQLDINITPHLPSEYINYLENPMEIINDAEKAAEKDIWSLMQFTENLRRQYGK 720
            IS PY +VQ DINI PHLPSEYINYLENPMEII++AEK+AE+DIWSLMQFTENLRRQYGK
Sbjct: 480  ISVPYQSVQFDININPHLPSEYINYLENPMEIISEAEKSAEEDIWSLMQFTENLRRQYGK 539

Query: 721  EP 726
            EP
Sbjct: 540  EP 541


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
          Length = 823

 Score =  436 bits (1121), Expect = e-120
 Identities = 215/242 (88%), Positives = 231/242 (95%)
 Frame = +1

Query: 1    VFYVLPRIKGLEEVKEFLEQSFPNLDTAIAHGKQYSKQLEETMENFAQGETKILICTNIV 180
            +FYVLPRIKGLEEV EFLE SFP+++ AIAHGKQYSKQLEETM+ FAQGE KILICTNIV
Sbjct: 483  IFYVLPRIKGLEEVMEFLECSFPDVEIAIAHGKQYSKQLEETMDRFAQGEIKILICTNIV 542

Query: 181  ESGLDIQDANTIIIQDVHQFGLAQLYQLRGRVGRADKEAHAHLFYPEKSLLSDQALERLT 360
            ESGLDIQ+ANTIIIQ+V QFGLAQLYQLRGRVGRADKEAHA+LFYP+KSLLSDQALERL+
Sbjct: 543  ESGLDIQNANTIIIQEVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLS 602

Query: 361  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVGDHRL 540
            ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKV +HRL
Sbjct: 603  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRL 662

Query: 541  ISAPYHTVQLDINITPHLPSEYINYLENPMEIINDAEKAAEKDIWSLMQFTENLRRQYGK 720
            IS PY +VQ DINI PHLPSEYINYLENPMEII++AEK+AE+DIWSLMQFTENLRRQYGK
Sbjct: 663  ISVPYQSVQFDININPHLPSEYINYLENPMEIISEAEKSAEEDIWSLMQFTENLRRQYGK 722

Query: 721  EP 726
            EP
Sbjct: 723  EP 724


>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
            predicted protein [Populus trichocarpa]
          Length = 817

 Score =  434 bits (1116), Expect = e-120
 Identities = 210/242 (86%), Positives = 229/242 (94%)
 Frame = +1

Query: 1    VFYVLPRIKGLEEVKEFLEQSFPNLDTAIAHGKQYSKQLEETMENFAQGETKILICTNIV 180
            VFYVLPRIKGLEEVK+FLEQSFPN++ A+AHG+QYSKQLE+TME FAQGE KILICTNIV
Sbjct: 477  VFYVLPRIKGLEEVKDFLEQSFPNVEIAVAHGQQYSKQLEDTMEQFAQGEIKILICTNIV 536

Query: 181  ESGLDIQDANTIIIQDVHQFGLAQLYQLRGRVGRADKEAHAHLFYPEKSLLSDQALERLT 360
            ESGLDIQ+ANTIIIQDV  FGLAQLYQLRGRVGRADKEAHAHLFYP+KS+L+DQALERL 
Sbjct: 537  ESGLDIQNANTIIIQDVQLFGLAQLYQLRGRVGRADKEAHAHLFYPDKSMLTDQALERLA 596

Query: 361  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVGDHRL 540
            ALEECR+LGQGFQLAERDMGIRGFG IFGEQQTGDVGNVG+D FFEMLFESLSKV +HR+
Sbjct: 597  ALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGVDFFFEMLFESLSKVDEHRV 656

Query: 541  ISAPYHTVQLDINITPHLPSEYINYLENPMEIINDAEKAAEKDIWSLMQFTENLRRQYGK 720
            IS PY +VQ+D+NI PHLPS+YINYLENPMEIIN+AEKAAE DIWSLMQFTENLRRQYGK
Sbjct: 657  ISVPYQSVQIDLNINPHLPSDYINYLENPMEIINEAEKAAETDIWSLMQFTENLRRQYGK 716

Query: 721  EP 726
            EP
Sbjct: 717  EP 718


>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
            lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
            ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
          Length = 823

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/242 (86%), Positives = 228/242 (94%)
 Frame = +1

Query: 1    VFYVLPRIKGLEEVKEFLEQSFPNLDTAIAHGKQYSKQLEETMENFAQGETKILICTNIV 180
            VFYVLPRIKGLEEV +FLE++FP++D A+AHGKQYSKQLEETME FAQG+ KILICTNIV
Sbjct: 483  VFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKILICTNIV 542

Query: 181  ESGLDIQDANTIIIQDVHQFGLAQLYQLRGRVGRADKEAHAHLFYPEKSLLSDQALERLT 360
            ESGLDIQ+ANTIIIQDV QFGLAQLYQLRGRVGRADKEAHA+LFYP+KSLLSDQALERL+
Sbjct: 543  ESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLS 602

Query: 361  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVGDHRL 540
            ALEECR+LGQGFQLAERDMGIRGFG IFGEQQTGDVGNVGIDLFFEMLFESLSKV + R+
Sbjct: 603  ALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEELRI 662

Query: 541  ISAPYHTVQLDINITPHLPSEYINYLENPMEIINDAEKAAEKDIWSLMQFTENLRRQYGK 720
             S PY  V++DINI P LPSEY+NYLENPMEIIN+AEKAAEKD+WSLMQFTENLRRQYGK
Sbjct: 663  FSVPYDLVKIDININPRLPSEYVNYLENPMEIINEAEKAAEKDMWSLMQFTENLRRQYGK 722

Query: 721  EP 726
            EP
Sbjct: 723  EP 724


>ref|XP_003548486.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 826

 Score =  425 bits (1093), Expect = e-117
 Identities = 207/242 (85%), Positives = 227/242 (93%)
 Frame = +1

Query: 1    VFYVLPRIKGLEEVKEFLEQSFPNLDTAIAHGKQYSKQLEETMENFAQGETKILICTNIV 180
            VFYVLPRIKGL+EV  FL +SFPN++ AIAHGK YSKQLE+TME FA GE KILICTNIV
Sbjct: 486  VFYVLPRIKGLDEVMTFLAESFPNVEIAIAHGKLYSKQLEDTMEKFALGEIKILICTNIV 545

Query: 181  ESGLDIQDANTIIIQDVHQFGLAQLYQLRGRVGRADKEAHAHLFYPEKSLLSDQALERLT 360
            ESGLDIQ+ANTIIIQDV QFGLAQLYQLRGRVGRADKEAHA+LFYP+KSLLSDQALERL 
Sbjct: 546  ESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLA 605

Query: 361  ALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVGDHRL 540
            A+EECR+LGQGFQLAE+DMGIRGFG IFGEQQ+GDVGNVGIDLFFEMLFESLSKV DHR+
Sbjct: 606  AIEECRELGQGFQLAEKDMGIRGFGAIFGEQQSGDVGNVGIDLFFEMLFESLSKVEDHRV 665

Query: 541  ISAPYHTVQLDINITPHLPSEYINYLENPMEIINDAEKAAEKDIWSLMQFTENLRRQYGK 720
            +S PYH+VQ+DINI PHLPS+YINYLENP++IINDAE+ AEKDIWSLMQFTENLRRQYGK
Sbjct: 666  VSVPYHSVQVDININPHLPSDYINYLENPLKIINDAERVAEKDIWSLMQFTENLRRQYGK 725

Query: 721  EP 726
            EP
Sbjct: 726  EP 727