BLASTX nr result

ID: Cimicifuga21_contig00028157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028157
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase A...    76   3e-12
emb|CBI37818.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putativ...    72   5e-11
ref|XP_003592676.1| Serine/threonine protein kinase ATR [Medicag...    67   1e-09
ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase ATR-like [Vitis
           vinifera]
          Length = 2730

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +1

Query: 34  TKCLSIQALSKIGVGLTTESVIEVLDLAFHDXXXXXXXXXXXSMPVIVIFSGLGVLAHMF 213
           TKCLS+Q  SKIG  L TES++EVLDL  HD           SMPVIV++SGL VL H+F
Sbjct: 600 TKCLSVQVQSKIGPSLKTESILEVLDLGLHDEADEVRIEAVISMPVIVLWSGLDVLRHVF 659

Query: 214 ERLEFL 231
            RL+FL
Sbjct: 660 RRLDFL 665


>emb|CBI37818.3| unnamed protein product [Vitis vinifera]
          Length = 2496

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +1

Query: 34  TKCLSIQALSKIGVGLTTESVIEVLDLAFHDXXXXXXXXXXXSMPVIVIFSGLGVLAHMF 213
           TKCLS+Q  SKIG  L TES++EVLDL  HD           SMPVIV++SGL VL H+F
Sbjct: 595 TKCLSVQVQSKIGPSLKTESILEVLDLGLHDEADEVRIEAVISMPVIVLWSGLDVLRHVF 654

Query: 214 ERLEFL 231
            RL+FL
Sbjct: 655 RRLDFL 660


>ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putative [Ricinus communis]
           gi|223539506|gb|EEF41094.1| Serine/threonine-protein
           kinase ATR, putative [Ricinus communis]
          Length = 2822

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/65 (56%), Positives = 44/65 (67%)
 Frame = +1

Query: 37  KCLSIQALSKIGVGLTTESVIEVLDLAFHDXXXXXXXXXXXSMPVIVIFSGLGVLAHMFE 216
           KC S+Q +SK+G    TESV+EVLDL  HD           SMPVIV++SGL VLA MF+
Sbjct: 604 KCNSVQVVSKLGPSFKTESVMEVLDLGLHDGAEEVRLETIVSMPVIVLWSGLDVLAQMFK 663

Query: 217 RLEFL 231
           RLEFL
Sbjct: 664 RLEFL 668


>ref|XP_003592676.1| Serine/threonine protein kinase ATR [Medicago truncatula]
           gi|355481724|gb|AES62927.1| Serine/threonine protein
           kinase ATR [Medicago truncatula]
          Length = 1101

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = +1

Query: 1   LVVAPTQSLCMTKCLSIQALSKIGVGLTTESVIEVLDLAFHDXXXXXXXXXXXSMPVIVI 180
           L+    Q     KCLS+Q LSK+G GL+TE V+EVLDL   D           SMPV+V+
Sbjct: 580 LIAIDNQLPWKIKCLSLQVLSKLGPGLSTEVVLEVLDLGLRDEAEEVRTEAAISMPVMVL 639

Query: 181 FSGLGVLAHMFERLEFL 231
           +SGL V   +FER+E+L
Sbjct: 640 WSGLDVSPPVFERMEYL 656


>ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|222848502|gb|EEE86049.1|
           predicted protein [Populus trichocarpa]
          Length = 2740

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%)
 Frame = +1

Query: 34  TKCLSIQALSKIGVGLTTESVIEVLDLAFHDXXXXXXXXXXXSMPVIVIFSGLGVLAHMF 213
           TKC SIQ +SK+G  L TE  +E+LDL  +D           SMPVIV++SGLG+ A MF
Sbjct: 627 TKCFSIQVVSKLGSILKTEHALELLDLGLNDEAEEVRIETITSMPVIVLWSGLGLQAEMF 686

Query: 214 ERLEFL 231
           +RL+ L
Sbjct: 687 KRLDLL 692


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