BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028147
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   121   7e-26
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   121   7e-26

>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/92 (61%), Positives = 72/92 (78%)
 Frame = -2

Query: 372 TLDKTVYVGHHRSLTSAGKFGEAEKVLDKMRNAGFEPDILIYRHLVFGLCKTGKLEEAIK 193
           +L K +Y G HRSLTS GKF +AE ++  MRNAG+EPD + Y  LVFGLCK  +LEEA K
Sbjct: 362 SLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARK 421

Query: 192 VLDEMEAKGCVPDMKTWRFLIEGHCKAAEIEL 97
           VLDEMEA+GC+PD+KTW  LI+GHC A E+++
Sbjct: 422 VLDEMEAQGCIPDIKTWTILIQGHCNANELDI 453


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/91 (62%), Positives = 72/91 (79%)
 Frame = -2

Query: 372 TLDKTVYVGHHRSLTSAGKFGEAEKVLDKMRNAGFEPDILIYRHLVFGLCKTGKLEEAIK 193
           +L K+VY G HRS TSAGKF EAEK++  MR+AG+EPD + Y  LVFGLCK+ +LEEA K
Sbjct: 216 SLSKSVYDGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACK 275

Query: 192 VLDEMEAKGCVPDMKTWRFLIEGHCKAAEIE 100
           VLDEMEA GC+PD+KTW  LI+GH  A +++
Sbjct: 276 VLDEMEAGGCIPDIKTWTILIQGHFAANQVD 306


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = -2

Query: 372 TLDKTVYVGHHRSLTSAGKFGEAEKVLDKMRNAGFEPDILIYRHLVFGLCKTGKLEEAIK 193
           +L K VY G HRSLTS G+F EA K+++ MR+AG EPD + Y  LV+GLCK  KLEEA K
Sbjct: 369 SLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACK 428

Query: 192 VLDEMEAKGCVPDMKTWRFLIEGHCKAAEIE 100
           +LDEMEA GCVPD+KTW  LI+GHC A E++
Sbjct: 429 LLDEMEACGCVPDIKTWTILIQGHCAAKEVD 459


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/91 (61%), Positives = 69/91 (75%)
 Frame = -2

Query: 372 TLDKTVYVGHHRSLTSAGKFGEAEKVLDKMRNAGFEPDILIYRHLVFGLCKTGKLEEAIK 193
           +L K VY G HRSLTS G+F EAE++   MRNAG+EPD + Y  LVFGLCK  +LEEA  
Sbjct: 364 SLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARG 423

Query: 192 VLDEMEAKGCVPDMKTWRFLIEGHCKAAEIE 100
           VLD+MEA+GC PD+KTW  LI+GHCK  E++
Sbjct: 424 VLDQMEAQGCFPDIKTWTILIQGHCKNNELD 454


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g48250, chloroplastic; Flags: Precursor
           gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
           thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/91 (61%), Positives = 69/91 (75%)
 Frame = -2

Query: 372 TLDKTVYVGHHRSLTSAGKFGEAEKVLDKMRNAGFEPDILIYRHLVFGLCKTGKLEEAIK 193
           +L K VY G HRSLTS G+F EAE++   MRNAG+EPD + Y  LVFGLCK  +LEEA  
Sbjct: 367 SLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARG 426

Query: 192 VLDEMEAKGCVPDMKTWRFLIEGHCKAAEIE 100
           VLD+MEA+GC PD+KTW  LI+GHCK  E++
Sbjct: 427 VLDQMEAQGCFPDIKTWTILIQGHCKNNELD 457