BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028140
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   362   6e-98
ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi...   323   5e-86
ref|XP_002872270.1| pentatricopeptide repeat-containing protein ...   323   5e-86

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  379 bits (973), Expect = e-103
 Identities = 179/255 (70%), Positives = 212/255 (83%)
 Frame = +2

Query: 2   VGWSTLLTLANIYIKAGLVGKATAALKTAEQKLSTHKRLGYFFLITQYAKLSNKDGILRL 181
           VGWSTL TLANIY+K+GL+ KA  ALK AE+KLS H RLGYFFLIT YA LSNK+ +LRL
Sbjct: 216 VGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRL 275

Query: 182 WEASKAVSGRITCANYMCVISCLVKIGDIAEAEKAFRSWESECGKYDIRVSNILLGAYAR 361
           WEASK V GRIT  NYMC++ CLVK+GDIAEAE+ FR WES+C KYDIRVSN+LLGAY R
Sbjct: 276 WEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMR 335

Query: 362 NGRMDKAESLHLYTLEKGGCPNYKTWEILMEGWVKSKEMDKAITAMKKGFSMLKHCDWRP 541
            G MDKAESLHL+TLE+GGCPNYKTWEILMEGW+KS+ MDKAI AMKKGFSMLKHCDWRP
Sbjct: 336 TGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRP 395

Query: 542 SSTIVMAIAEHFEERGQFEDTKKYVKVLRRLGLASLPLYKSLLQVYVHAQKPAPDILKMM 721
           +  +V AIA + EE G   D  +YVKV+ +LG+A LPLYKSLL++++  Q+P  DILKMM
Sbjct: 396 NHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMM 455

Query: 722 ENDKIDIDEEAFALI 766
           E D+I++D+E  AL+
Sbjct: 456 EKDEIEMDDETSALV 470


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  375 bits (963), Expect = e-102
 Identities = 178/257 (69%), Positives = 213/257 (82%), Gaps = 2/257 (0%)
 Frame = +2

Query: 2    VGWSTLLTLANIYIKAGLVGKATAALKTAEQKLSTHKRLGYFFLITQYAKLSNKDGILRL 181
            VGWSTL +LAN+YIKAG V KA   LK AE KLST+ RLGYFFLIT Y+ L NK+G+LRL
Sbjct: 251  VGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRL 310

Query: 182  WEASKAVSGRITCANYMCVISCLVKIGDIAEAEKAFRSWESECGKYDIRVSNILLGAYAR 361
            WEASKAV GRI CA+YMCVISCLVK+GD+  AE+ F  WE+ C KYDIRVSN+LLGAY R
Sbjct: 311  WEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVR 370

Query: 362  NGRMDKAESLHLYTLEKGGCPNYKTWEILMEGWVKSKEMDKAITAMKKGFSMLK--HCDW 535
            NG M KAES HL+T+E+GGCPNYKTWEILMEGWVKS++MDKAI AMKKGFS+LK   CDW
Sbjct: 371  NGLMGKAESFHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDW 430

Query: 536  RPSSTIVMAIAEHFEERGQFEDTKKYVKVLRRLGLASLPLYKSLLQVYVHAQKPAPDILK 715
            RPS +I+MAIAEHFE+ G FED   Y+K +  LG+A+LPLYK  L++Y++AQ+PA DILK
Sbjct: 431  RPSHSILMAIAEHFEKHGNFEDANHYIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILK 490

Query: 716  MMENDKIDIDEEAFALI 766
            MME D+I++D+E  AL+
Sbjct: 491  MMEKDRIELDDETSALV 507


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  362 bits (930), Expect = 6e-98
 Identities = 172/255 (67%), Positives = 207/255 (81%)
 Frame = +2

Query: 2   VGWSTLLTLANIYIKAGLVGKATAALKTAEQKLSTHKRLGYFFLITQYAKLSNKDGILRL 181
           VGWSTL TLANIY KAG+V KA  ALK AE+ LST   LGYFFL+TQY+ L NK+G+ RL
Sbjct: 235 VGWSTLATLANIYTKAGIVDKALLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRL 294

Query: 182 WEASKAVSGRITCANYMCVISCLVKIGDIAEAEKAFRSWESECGKYDIRVSNILLGAYAR 361
           WEA K V+GRITCANYMCV+SCLVK+GD+ EAEK FR WE  C KYDIRVSN+LLGAY R
Sbjct: 295 WEACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVR 354

Query: 362 NGRMDKAESLHLYTLEKGGCPNYKTWEILMEGWVKSKEMDKAITAMKKGFSMLKHCDWRP 541
            G M+KAESLHL+TL++GGCPNYKT EILMEGWVKS++MDKAI AM +  SML+HC WRP
Sbjct: 355 KGLMNKAESLHLHTLDRGGCPNYKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRP 414

Query: 542 SSTIVMAIAEHFEERGQFEDTKKYVKVLRRLGLASLPLYKSLLQVYVHAQKPAPDILKMM 721
           S  I+M+IAEH E    FED   +++V+  LG+ASLPLYK LL++++HAQ+ A DILKMM
Sbjct: 415 SHGIIMSIAEHLERNRNFEDANHFIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMM 474

Query: 722 ENDKIDIDEEAFALI 766
           E DKI++D+E  AL+
Sbjct: 475 EKDKIELDDETSALV 489


>ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Glycine max]
          Length = 530

 Score =  323 bits (827), Expect = 5e-86
 Identities = 156/259 (60%), Positives = 196/259 (75%)
 Frame = +2

Query: 2    VGWSTLLTLANIYIKAGLVGKATAALKTAEQKLSTHKRLGYFFLITQYAKLSNKDGILRL 181
            VGWS+L TLAN Y KAG   KA   LK AE+KLST  RLGYFFLIT YA L  K+G+LRL
Sbjct: 262  VGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLYASLKEKEGVLRL 321

Query: 182  WEASKAVSGRITCANYMCVISCLVKIGDIAEAEKAFRSWESECGKYDIRVSNILLGAYAR 361
            WEASKAV GRI+CANY+C++ CLVK+GDI +A++ F  WES C KYDIRVSN+LLGAYAR
Sbjct: 322  WEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYAR 381

Query: 362  NGRMDKAESLHLYTLEKGGCPNYKTWEILMEGWVKSKEMDKAITAMKKGFSMLKHCDWRP 541
            NG M++AESLHL+TL+KGGCPNYKT EILMEG+V  ++MD+AI  MK+  +M+K C WRP
Sbjct: 382  NGSMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRP 441

Query: 542  SSTIVMAIAEHFEERGQFEDTKKYVKVLRRLGLASLPLYKSLLQVYVHAQKPAPDILKMM 721
               +V+AIAE+ E+ G  +   KY+  LR  GL SL LYK LL++++ A KP   ILKMM
Sbjct: 442  PHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLYKILLRMHLSANKPPFHILKMM 501

Query: 722  ENDKIDIDEEAFALINCLT 778
            + DKI++D E  +++   T
Sbjct: 502  DEDKIEMDNETLSILKAFT 520


>ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318107|gb|EFH48529.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 492

 Score =  323 bits (827), Expect = 5e-86
 Identities = 154/249 (61%), Positives = 192/249 (77%)
 Frame = +2

Query: 2   VGWSTLLTLANIYIKAGLVGKATAALKTAEQKLSTHKRLGYFFLITQYAKLSNKDGILRL 181
           VGWS+L TLAN+YIK G   KA   L+ AE+ L+   RLGYFFLIT YA L +K+G++RL
Sbjct: 244 VGWSSLCTLANVYIKGGFDEKAKLVLENAEKLLNRSNRLGYFFLITLYASLGDKEGVVRL 303

Query: 182 WEASKAVSGRITCANYMCVISCLVKIGDIAEAEKAFRSWESECGKYDIRVSNILLGAYAR 361
           WEASK V GRI+CANY+CV+S LVKIGD+ EAE+ F  WE++C  YD+RVSN+LLGAY R
Sbjct: 304 WEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFNEWEAQCFNYDVRVSNVLLGAYMR 363

Query: 362 NGRMDKAESLHLYTLEKGGCPNYKTWEILMEGWVKSKEMDKAITAMKKGFSMLKHCDWRP 541
           NG + KAESLH   LE+GG PNYKTWEILMEGWVK + M+KAI AM + F ++K C WRP
Sbjct: 364 NGEIRKAESLHARVLERGGNPNYKTWEILMEGWVKCQSMEKAIVAMHRAFELMKGCHWRP 423

Query: 542 SSTIVMAIAEHFEERGQFEDTKKYVKVLRRLGLASLPLYKSLLQVYVHAQKPAPDILKMM 721
           S +IVMAIA++FEE  + E+   Y++ L  LGLASLPLY+ LL++  HAQ+PA DI +MM
Sbjct: 424 SESIVMAIAKYFEEEEKIEEANTYIRDLHHLGLASLPLYRLLLRMQEHAQRPAFDIYEMM 483

Query: 722 ENDKIDIDE 748
           + DKI IDE
Sbjct: 484 KLDKIGIDE 492