BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028127
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563379.1| PREDICTED: F-box protein At5g07610-like [Bra...    66   4e-09
ref|XP_003565853.1| PREDICTED: F-box protein At5g07610-like [Bra...    62   7e-08
ref|XP_003572562.1| PREDICTED: F-box protein At5g07610-like [Bra...    60   2e-07
ref|XP_003561635.1| PREDICTED: F-box protein At5g07610-like [Bra...    60   2e-07
ref|XP_002442911.1| hypothetical protein SORBIDRAFT_08g004760 [S...    60   4e-07

>ref|XP_003563379.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 383

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
 Frame = -2

Query: 586 KSLPPSITGFFRR----QGSIFEPNGGMTNFLDTSNSSNSFHVVDKTLTFLSSIIGPVIV 419
           + LP +++GFFR      G     +    N + +       HV D +L+FL      +I 
Sbjct: 52  RKLPQTLSGFFRYAVGPDGDGKAISAPYFNSIISGLGEEERHVHDPSLSFLPGYYRSIIP 111

Query: 418 VDSNNGLLLCAHKPIDWKTW--TPIRYFICNPVTKQWIALPESAHCDYSASALLYSYDVD 245
            D  NGLLLC    I WK        Y +CNP T++W+ LP+S   D  +   +     D
Sbjct: 112 KDCCNGLLLC----ICWKDSPSNEFHYVVCNPATEKWLILPQS---DQDSQMFVIRVGFD 164

Query: 244 EFCAQKTEFKVYCFLK-KNPNLLEVEIYSSETRKWKKPKEYHHVWFLKEFNCIVLFNWSA 68
              A    F V+  L+ +N  +  V++YSSE + W   KE    + +  +   V  N   
Sbjct: 165 P--AVSPHFHVFSVLRDQNRFITGVDVYSSEAQAWSY-KESGWAYGIMVYEPSVFLNGMM 221

Query: 67  YWLQEDGTVAVCNVENETLRSI 2
           +++    T+   + E ++ ++I
Sbjct: 222 HFISCASTIVALDTEGKSWKTI 243


>ref|XP_003565853.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 366

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
 Frame = -2

Query: 586 KSLPPSITGFFRRQGSIFEPNGGMTNFLDTSNSSNSFHVVDKTLTFLSSIIGPVIVVDSN 407
           K LP ++ GF     S   P    TN    S     + +     +FL      + ++D  
Sbjct: 50  KKLPQTLAGFLYTSLSGLLPALAFTN---ASPQEERYPIFPSNFSFLPEF-QDIRIMDCC 105

Query: 406 NGLLLCAHKPIDWKTWTPIRYFICNPVTKQWIALPESAHCDYSASALLYSYDVDEFCAQK 227
           NGLLLC      W++     Y +CNP T+++  +P S + D   +A L  +D     ++ 
Sbjct: 106 NGLLLCRL----WESTDDFHYVLCNPATEKFTTVPPSGNADNLYAARL-GFDPAVSSSRF 160

Query: 226 TEFKVYCFLKKNPNLLEVEIYSSETRKW-KKPKEYHHVWFLK-EFNCIVLFNWSAYWLQE 53
             F++  + + +P +  V +YSSETR+W  K  E+     L+   +  V  N S + L +
Sbjct: 161 HVFELVEYEEDDPVITGVRVYSSETREWVHKEVEWSDDALLESRLSRTVFLNGSLHILTD 220

Query: 52  DGTVAVCNVENETLRSI 2
              V   + E +T R I
Sbjct: 221 QPAVLTVDTELKTWRKI 237


>ref|XP_003572562.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 368

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
 Frame = -2

Query: 577 PPSITGFFRRQGSIFEPNGGMTNFLDTSNSSNSFHVVDKTLTFLSSIIGPVIVVDSNNGL 398
           P ++ GFF              +F++ S       V+  +  FL      ++++D  NGL
Sbjct: 48  PHTLVGFFHSSFCCERFPVSALHFINISGKGRP--VISPSFAFLPKHES-IVLLDCCNGL 104

Query: 397 LLCAHKPIDWKTWTPIRYFICNPVTKQWIALPES--AHCDYSASALLYSYDVDEFCAQKT 224
           LLC       +     RY +CNP TK+W  LP+S  A  D  + A L  +D     A  +
Sbjct: 105 LLC-----HLQAQGAARYVVCNPTTKKWAMLPDSGLAVADKMSVARL-GFDP----AVSS 154

Query: 223 EFKVYCFLKKNPN--LLEVEIYSSETRKW--KKPKEYHHVWFLKEFNCIVLFNWSAYWLQ 56
            F V+ FL++     ++ +E+YSSET  W  K+      + FL   +  V  N S +++ 
Sbjct: 155 HFHVFEFLEEGSEDMVVALEVYSSETGGWVHKQIGWADAISFLDPESATVFLNGSLHFVS 214

Query: 55  EDGTVAVCNVENETLRSI 2
               +AV + E ET R I
Sbjct: 215 LVPAIAVVDTEGETWRII 232


>ref|XP_003561635.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 373

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
 Frame = -2

Query: 586 KSLPPSITGFFR---RQGSIFEPNGGMTNFLDTSNSSNSFHVVDKTLTFLSSIIGPVIVV 416
           K  P +++GFF    R+   FEP+    +F  T+ S     +VD +L+FL S    ++ V
Sbjct: 52  KKSPQTLSGFFYHSVRKRDPFEPSDHRCHF--TNLSGRGRPMVDPSLSFLPSC-ARILFV 108

Query: 415 DSNNGLLLCAHKPIDWKTWTPIRYFICNPVTKQWIALPESAHCDYSASALLYSYDVDEFC 236
           D  NGLLLC  +     + +   Y +CNP T++W  LP     D  A    Y+  +    
Sbjct: 109 DCCNGLLLC--RCFKMPSLSRSYYVVCNPATEKWTVLP-----DTKAMQGFYTVRLGFDP 161

Query: 235 AQKTEFKVYCFLKKNPNLLE-----VEIYSSETRKW 143
           A  + F+V+  ++     L+     V+IYS ET +W
Sbjct: 162 AVSSNFRVFLLVQSGVGNLDIPVTGVQIYSPETGEW 197


>ref|XP_002442911.1| hypothetical protein SORBIDRAFT_08g004760 [Sorghum bicolor]
           gi|241943604|gb|EES16749.1| hypothetical protein
           SORBIDRAFT_08g004760 [Sorghum bicolor]
          Length = 384

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
 Frame = -2

Query: 469 VDKTLTFLSSIIGPVIVVDSNNGLLLCAHKPIDWKTWTPIRYFICNPVTKQWIALPESAH 290
           VD  L+FL      + ++DS NGLLL     + W    P  Y +CNP T  W+ LP+ +H
Sbjct: 82  VDTALSFLPPSCAGMELLDSCNGLLLLRSSRVPWSP-RPRFYVVCNPATGDWVTLPQPSH 140

Query: 289 ------------CDYSASALLYSYDVDEFCAQKTEFKVYCFLKKNPNLLEV----EIYSS 158
                        D +       +D     A    F V+  ++K    ++V    EIYSS
Sbjct: 141 APGEMCYDDAMMADKNTCVAALGFDP----ATSLHFHVFQLVEKEDQFVDVVVAMEIYSS 196

Query: 157 ETRKWKKPKEYHHVWFLKEFNCIVLFNWSAYWLQEDGTVAVCNVENETLR 8
           ET KW   +       L       L  +  + + +D  VA  + + +T R
Sbjct: 197 ETGKWILKESGWSKSILCNLQMTYLNGFLHFGIIDDDAVASVDTKGQTWR 246