BLASTX nr result

ID: Cimicifuga21_contig00028109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028109
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ52907.1| proliferating cell nuclear antigen gene-controlli...   144   2e-32
ref|XP_002281963.1| PREDICTED: transcription factor TCP11 [Vitis...   142   9e-32
ref|XP_003541424.1| PREDICTED: transcription factor TCP11-like [...   140   3e-31
ref|XP_003590456.1| Transcription factor TCP15 [Medicago truncat...   140   3e-31
ref|XP_002519510.1| conserved hypothetical protein [Ricinus comm...   139   6e-31

>gb|ACZ52907.1| proliferating cell nuclear antigen gene-controlling element binding
           factor [Pisum sativum]
          Length = 216

 Score =  144 bits (364), Expect = 2e-32
 Identities = 88/172 (51%), Positives = 107/172 (62%), Gaps = 19/172 (11%)
 Frame = -3

Query: 633 TAVPNPNIAIST--RTIRSNVGKPKDRHTKVNGRGRRVRIPTLCAARIFQLTRELGHKSD 460
           T   +PN+ +ST  RT  +     KDRHTKVNGRGRRVR+P LCAARIFQLTRELGH+SD
Sbjct: 40  TTDSDPNLQLSTVRRTSTTASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSD 99

Query: 459 GETIEWLLRHAEPSIIAATGTGTAPSDPISTSSGPILTPPPPLSSNSVMAPIQAVSQNQI 280
           GETIEWLLR AEPSIIAATGTGT P+DP+ST          P+SS+SV    Q+VS N  
Sbjct: 100 GETIEWLLRQAEPSIIAATGTGTVPADPVSTIF--------PVSSSSV----QSVSCNVH 147

Query: 279 PTTQFC-SYQESGSMGR----------------LAYTGFNGYWNMPFTSMML 175
           P +  C   Q+  + G                 + Y   N Y +MPFT+++L
Sbjct: 148 PVSSVCHGSQDVFAAGMPLQQPSCRLDLCQPIGMEYAAENRYRHMPFTALLL 199


>ref|XP_002281963.1| PREDICTED: transcription factor TCP11 [Vitis vinifera]
          Length = 204

 Score =  142 bits (358), Expect = 9e-32
 Identities = 79/144 (54%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
 Frame = -3

Query: 567 KDRHTKVNGRGRRVRIPTLCAARIFQLTRELGHKSDGETIEWLLRHAEPSIIAATGTGTA 388
           +DRHTKVNGRGRRVR+P LCAARIFQLTRELGH+SDGETIEWLLR AEPSIIAATGTGT 
Sbjct: 52  RDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTV 111

Query: 387 PSDPISTSSGPILTPPPPLSSNSVMAPIQAVSQNQIPTTQFCSYQESGSMG-----RLAY 223
           P+  +S SSG         ++   + P+ +V    +PT  F     S  +       L +
Sbjct: 112 PATSVS-SSGTANPSSSTATTACKVQPLTSVPSGHVPTGMFTMAPPSCRLDLCQPVTLEF 170

Query: 222 TGFNGYWNMPFTSMMLDSVNEGAD 151
            G NGY +MPFTS++L S  E A+
Sbjct: 171 PG-NGYRHMPFTSLLLQSGTEEAE 193


>ref|XP_003541424.1| PREDICTED: transcription factor TCP11-like [Glycine max]
          Length = 185

 Score =  140 bits (354), Expect = 3e-31
 Identities = 81/166 (48%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
 Frame = -3

Query: 630 AVPNPNIAISTRTIRSNVGKPKDRHTKVNGRGRRVRIPTLCAARIFQLTRELGHKSDGET 451
           +V  P++A++ R         KDRHTKVNGRGRRVR+P LCAARIFQLTRELGH+SDGET
Sbjct: 27  SVAPPSLAVAKRP------STKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGET 80

Query: 450 IEWLLRHAEPSIIAATGTGTAPSDPISTSSGPILTPPPPLSSNSVMAPIQAVSQN---QI 280
           IEWLLRHAE SIIAATG+GT P+ P+S+     + P  P S   V  P+ AV       +
Sbjct: 81  IEWLLRHAETSIIAATGSGTVPAAPVSS-----VGPSAPSSEPMVACPVTAVGAQGMFAV 135

Query: 279 PTTQFCSYQESGSMGRLAYTGFNGYWNMPFTSMMLDSVNEGADGED 142
           P    C    S   G       NGY +MPFT+++L       +  D
Sbjct: 136 PPQPSCRLDLSPPPG--MEFAVNGYRHMPFTALLLQPATADENQND 179


>ref|XP_003590456.1| Transcription factor TCP15 [Medicago truncatula]
           gi|355479504|gb|AES60707.1| Transcription factor TCP15
           [Medicago truncatula]
          Length = 205

 Score =  140 bits (354), Expect = 3e-31
 Identities = 83/174 (47%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
 Frame = -3

Query: 633 TAVPNPNIAISTRTIRSNVGKPKDRHTKVNGRGRRVRIPTLCAARIFQLTRELGHKSDGE 454
           T   +PN  ++ R   S     KDRHTKVNGRGRRVR+P LCAARIFQLTRELGH+SDGE
Sbjct: 30  TTSSDPNTKLTVRRPASR--STKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGE 87

Query: 453 TIEWLLRHAEPSIIAATGTGTAPSDPISTSSGPILTPPPPLSSNSVMAPIQAVSQN---- 286
           TIEWLLRHAEPSIIAATGTGT P+ P+STSS    +  P +S +  + P   V       
Sbjct: 88  TIEWLLRHAEPSIIAATGTGTVPAGPVSTSSPFTSSSLPSVSCH--VQPATTVGPGGGGI 145

Query: 285 -------QIPTTQFCSYQESGSMGRLAYTGFNGYWNMPFTSMMLDSVNEGADGE 145
                  Q P+ +    Q +G    + Y   + Y +MPFT+++L     G + +
Sbjct: 146 FGMALPMQPPSCRLDLSQPAG----MDYGTASRYHHMPFTTLLLQPTTTGEENQ 195


>ref|XP_002519510.1| conserved hypothetical protein [Ricinus communis]
           gi|223541373|gb|EEF42924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score =  139 bits (351), Expect = 6e-31
 Identities = 81/156 (51%), Positives = 97/156 (62%), Gaps = 5/156 (3%)
 Frame = -3

Query: 627 VPNPNIAISTRTIRSNVGKP-----KDRHTKVNGRGRRVRIPTLCAARIFQLTRELGHKS 463
           +P P      RT  ++ G+P     KDRHTKVNGRGRRVR+P LCAARIFQLTRELGH+S
Sbjct: 24  IPAPTTESQPRTQLTSHGRPTNSLSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRS 83

Query: 462 DGETIEWLLRHAEPSIIAATGTGTAPSDPISTSSGPILTPPPPLSSNSVMAPIQAVSQNQ 283
           DGETIEWLLR AEPSIIAATGTGT P+DP+ST++G I  P     S SV   + +V    
Sbjct: 84  DGETIEWLLRQAEPSIIAATGTGTVPADPVSTTTGHIPFP----VSQSVPCKVHSVGGGG 139

Query: 282 IPTTQFCSYQESGSMGRLAYTGFNGYWNMPFTSMML 175
                F           L Y       +MPFT+++L
Sbjct: 140 HGHGMFALTAAPSCRLDLEYR------HMPFTALLL 169


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