BLASTX nr result

ID: Cimicifuga21_contig00028062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028062
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266101.2| PREDICTED: uncharacterized protein LOC100245...    98   6e-19
emb|CBI18733.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002334000.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CBI38499.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002322369.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002266101.2| PREDICTED: uncharacterized protein LOC100245282 [Vitis vinifera]
          Length = 702

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = +1

Query: 10  DTVLHE-AIGTNMTRVVDKILEAVPQLLTMRNIKDETPLFRAVQFGKTKMLKYLAETNRF 186
           +T+LHE A   +MT V  +IL   P+LLT RNI  ETPLFRAV++GK +M K LAE    
Sbjct: 90  NTILHEVATNNSMTDVATEILNRTPKLLTARNILGETPLFRAVRYGKDEMFKLLAEKLDR 149

Query: 187 GDSLSNELHN---RRGDDATILHIAILNESFETALELLNLNLVNPQSIDGRGLTCLQNLA 357
            D  + E      +R D  TILHI++  E+F+ AL +         + D   +T LQ+LA
Sbjct: 150 MDFETEEDRKACLQRKDGTTILHISVFTENFDLALLIAERYGDLISAWDSNQMTALQHLA 209

Query: 358 NMPSAFKSGTRFGLLKKLVYICLN 429
             PSAF SG   G L++ +Y C++
Sbjct: 210 CNPSAFLSGCEHGHLRRFIYSCIS 233


>emb|CBI18733.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = +1

Query: 10  DTVLHE-AIGTNMTRVVDKILEAVPQLLTMRNIKDETPLFRAVQFGKTKMLKYLAETNRF 186
           +T+LHE A   +MT V  +IL   P+LLT RNI  ETPLFRAV++GK +M K LAE    
Sbjct: 153 NTILHEVATNNSMTDVATEILNRTPKLLTARNILGETPLFRAVRYGKDEMFKLLAEKLDR 212

Query: 187 GDSLSNELHN---RRGDDATILHIAILNESFETALELLNLNLVNPQSIDGRGLTCLQNLA 357
            D  + E      +R D  TILHI++  E+F+ AL +         + D   +T LQ+LA
Sbjct: 213 MDFETEEDRKACLQRKDGTTILHISVFTENFDLALLIAERYGDLISAWDSNQMTALQHLA 272

Query: 358 NMPSAFKSGTRFGLLKKLVYICLN 429
             PSAF SG   G L++ +Y C++
Sbjct: 273 CNPSAFLSGCEHGHLRRFIYSCIS 296


>ref|XP_002334000.1| predicted protein [Populus trichocarpa] gi|222839498|gb|EEE77835.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
 Frame = +1

Query: 1   SFGDTVLHEAIGTNMTRVVDKILEAVPQ---------LLTMRNIKDETPLFRAVQFGKTK 153
           ++G+TVLHEA+       V  +L+  P+          L  +N   ETPL+RA   GK +
Sbjct: 81  AYGNTVLHEAVFAGNMEAVQHLLKFTPKEQGEFHPSMQLQTKNALGETPLYRAAACGKKE 140

Query: 154 MLKYLA-ETNRFGDSLSNELHNRRGDDATILHIAILNESFETALELLNLNLVNPQSIDGR 330
           +++YLA +T +  +   +E H +R D   ILH AI  + F+TAL LLNL+    +  D +
Sbjct: 141 IVEYLAGQTGQISEGKLSEDHRKREDSKPILHAAIQGQHFDTALTLLNLDPSLYEMKDDQ 200

Query: 331 GLTCLQNLANMPSAFKSG--TRFGLLKKLVYICLN 429
           G+TCL  LA MPSAFKSG   R   +  L Y CL+
Sbjct: 201 GMTCLHVLAGMPSAFKSGYALRPITVTNLFYRCLS 235


>emb|CBI38499.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
 Frame = +1

Query: 43  MTRVVDKILEAVPQLLTMRNIKDETPLFRAVQFGKTKMLKYLAETNRFGDSLSNELHN-- 216
           MT V  +IL   P+LLT RNI  ETPLFRAV++GK +M K LAE     D  + E     
Sbjct: 1   MTDVATEILNRAPELLTARNILGETPLFRAVRYGKDEMFKLLAEKLDRMDFETEEDRKAC 60

Query: 217 -RRGDDATILHIAILNESFETALELLNLNLVNPQSIDGRGLTCLQNLANMPSAFKSGTRF 393
            RR D  TILHI++  E+F+ AL +         + D   +T LQ+LA  PSAF SG   
Sbjct: 61  LRRNDGTTILHISVFTENFDLALLIAERYGDLISAWDSNQMTALQHLACNPSAFLSGCEH 120

Query: 394 GLLKKLVYICLN 429
           G L++ +Y C++
Sbjct: 121 GHLRRFIYSCIS 132


>ref|XP_002322369.1| predicted protein [Populus trichocarpa] gi|222869365|gb|EEF06496.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
 Frame = +1

Query: 1   SFGDTVLHEAIGTNMTRVVDKILEAVPQ---------LLTMRNIKDETPLFRAVQFGKTK 153
           ++G+TVLHEA+       V  +L+  P+          L  +N   ETPL+RA   GK +
Sbjct: 85  AYGNTVLHEAVFAGNMEAVQHLLKFSPKEQGEFHPSMQLQTKNALGETPLYRAAACGKKE 144

Query: 154 MLKYLAE-TNRFGDSLSNELHNRRGDDATILHIAILNESFETALELLNLNLVNPQSIDGR 330
           ++++LAE T +       E H +RGD   ILH AI    F+TAL LLNL+    +  D +
Sbjct: 145 IVEHLAEQTGQIPGGKLLEDHRKRGDSKPILHAAIQGHHFDTALTLLNLDPSLYEMKDDQ 204

Query: 331 GLTCLQNLANMPSAFKSG--TRFGLLKKLVYICLN 429
           G+TCL  LA MPSAFKSG   R   +  L Y CL+
Sbjct: 205 GMTCLHVLAGMPSAFKSGYALRPITVTNLFYRCLS 239


Top