BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028060
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   128   5e-28
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group] g...   108   3e-22

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/90 (70%), Positives = 74/90 (82%)
 Frame = -2

Query: 275 LLGERKLKEAMNLLHFMIKHQYPPFLEPVVEYISKFGTVDDAREFLKALTIKQFPSSSAY 96
           LLG RKL+EA+NLLH M K  YPPF EP +EYISKFGTV+DA EFL AL+ K++PS SAY
Sbjct: 523 LLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFGTVEDAGEFLNALSAKKYPSQSAY 582

Query: 95  VHIFGSFFKEGRHFEARDLLYQCPPHIRNH 6
           VH+F SFF+EGR  EA+DLLY+CP HIR H
Sbjct: 583 VHVFESFFQEGRESEAKDLLYKCPHHIRKH 612


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/90 (63%), Positives = 76/90 (84%)
 Frame = -2

Query: 275 LLGERKLKEAMNLLHFMIKHQYPPFLEPVVEYISKFGTVDDAREFLKALTIKQFPSSSAY 96
           LL  RKL+EA+NLL  M +H +PPF EP V+YIS+FGTVDDA +FLKAL++K++PS+SAY
Sbjct: 521 LLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPSTSAY 580

Query: 95  VHIFGSFFKEGRHFEARDLLYQCPPHIRNH 6
           +++F SFF+ GRH EA+DLL++CP HIR H
Sbjct: 581 LNVFQSFFRAGRHSEAKDLLFKCPHHIRKH 610


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = -2

Query: 275 LLGERKLKEAMNLLHFMIKHQYPPFLEPVVEYISKFGTVDDAREFLKALTIKQFPSSSAY 96
           LL  RKL+EA+ LL  M K  YPPF EP V+YISKFGTV DA +FLK L+ K++PS SAY
Sbjct: 516 LLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAY 575

Query: 95  VHIFGSFFKEGRHFEARDLLYQCPPHIRNH 6
           +HIF SFF EGR+ EA+DLL++CP HIR H
Sbjct: 576 LHIFNSFFNEGRYSEAKDLLFKCPHHIRKH 605


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/88 (60%), Positives = 66/88 (75%)
 Frame = -2

Query: 275 LLGERKLKEAMNLLHFMIKHQYPPFLEPVVEYISKFGTVDDAREFLKALTIKQFPSSSAY 96
           LL  RKL+EA +LL  M KH YPPF EP  +YISKFGTV+DA  F K L++K++PSS AY
Sbjct: 370 LLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFGTVEDAVNFFKVLSVKEYPSSVAY 429

Query: 95  VHIFGSFFKEGRHFEARDLLYQCPPHIR 12
           + +  SF +EGR  EARDLL++CP HIR
Sbjct: 430 LRMLDSFLREGRDSEARDLLFKCPHHIR 457


>ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group]
           gi|15289974|dbj|BAB63669.1| pentatricopeptide (PPR)
           repeat-containing protein -like [Oryza sativa Japonica
           Group] gi|113535061|dbj|BAF07444.1| Os01g0970900 [Oryza
           sativa Japonica Group] gi|125573469|gb|EAZ14984.1|
           hypothetical protein OsJ_04919 [Oryza sativa Japonica
           Group] gi|215678751|dbj|BAG95188.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215693250|dbj|BAG88632.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 573

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/91 (56%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
 Frame = -2

Query: 275 LLGERKLKEAMNLLHFMIKHQYPPFLEPVVEYISKFGTVDDAREFLKALTIK-QFPSSSA 99
           LL  +KL+EA+ LL  M   ++PPF +P   +I+K+GT DDAR+FLKALT+  ++PS +A
Sbjct: 465 LLRVKKLEEALGLLRSMKARKFPPFADPFPTHIAKYGTFDDARQFLKALTVNNKYPSPTA 524

Query: 98  YVHIFGSFFKEGRHFEARDLLYQCPPHIRNH 6
           Y+H+F SFF EGR+ EA+DLLY+CP HIR H
Sbjct: 525 YLHVFKSFFTEGRYSEAQDLLYKCPFHIRKH 555