BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028056
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63
emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]   246   2e-63
ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containi...   227   1e-57
ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containi...   227   2e-57
ref|XP_003607207.1| Pentatricopeptide repeat-containing protein ...   212   6e-53

>ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 636

 Score =  246 bits (629), Expect = 2e-63
 Identities = 121/217 (55%), Positives = 159/217 (73%)
 Frame = -2

Query: 651 LIFFSALSPSGNLECAQAIFDQTTSKTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLDVK 472
           +I F +LSP G+L  AQAIF+ T     F+ NTMI+AY++S+FP+K I+LYN MHR D+K
Sbjct: 150 IISFLSLSPLGSLVYAQAIFEDTAMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIK 209

Query: 471 PDSFTYPFVLKACGKVSLQRREEEEKDMFEFFVGRKGAEIHCRAFQDGFYSDHFVQNSLI 292
            D FTYPF LKAC +V L   E + K   +  +  KGAEIHCR F+ G   D F+QNSL+
Sbjct: 210 SDHFTYPFGLKACARV-LWCNEGDIK-CTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLV 267

Query: 291 YMYGQCGLIDVSRLVFEEMSQRTVASWNTMIAVYDGINDFEAANSLFRLIPEKNVVSWNT 112
           Y+Y QCG +D++R VF+EM+++T+ SWN MI+ YD INDF++A+SL   +P KNVVSWN 
Sbjct: 268 YLYSQCGFLDLARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNM 327

Query: 111 LIGRYVKQGDIVAARRVFVEMPERDVISWNSMISGYV 1
           LI RY++ G I  A+ VF EMPERD +SWNSMI+GYV
Sbjct: 328 LIARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYV 364



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 36/141 (25%), Positives = 67/141 (47%)
 Frame = -2

Query: 621 GNLECAQAIFDQTTSKTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLDVKPDSFTYPFVL 442
           G +E A+ +F +   + +  +N+MI  Y Q     + + L+ +M   +V+    T   VL
Sbjct: 336 GKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVL 395

Query: 441 KACGKVSLQRREEEEKDMFEFFVGRKGAEIHCRAFQDGFYSDHFVQNSLIYMYGQCGLID 262
            AC +                 +GRK   IH    Q  +  + ++ N+L+ MY +CG ++
Sbjct: 396 GACAETGALE------------IGRK---IHLSLKQREYKIEGYLSNALVDMYAKCGHLN 440

Query: 261 VSRLVFEEMSQRTVASWNTMI 199
           ++  VF E+  + ++ WN MI
Sbjct: 441 LAWEVFSELKMKHISCWNAMI 461


>emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
          Length = 633

 Score =  246 bits (629), Expect = 2e-63
 Identities = 121/217 (55%), Positives = 159/217 (73%)
 Frame = -2

Query: 651 LIFFSALSPSGNLECAQAIFDQTTSKTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLDVK 472
           +I F +LSP G+L  AQAIF+ TT    F+ NTMI+AY++S+FP+K I+LYN MHR D+K
Sbjct: 44  IISFLSLSPLGSLVYAQAIFEDTTMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIK 103

Query: 471 PDSFTYPFVLKACGKVSLQRREEEEKDMFEFFVGRKGAEIHCRAFQDGFYSDHFVQNSLI 292
            D F YPF LKAC +V L   E + K   +  +  KGAEIHCR F+ G   D F+QNSL+
Sbjct: 104 SDHFMYPFGLKACARV-LWCNEGDIK-CTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLV 161

Query: 291 YMYGQCGLIDVSRLVFEEMSQRTVASWNTMIAVYDGINDFEAANSLFRLIPEKNVVSWNT 112
           Y+Y QCG +D++R VF+EM+++T+ SWN MI+ YD INDF++A+SL   +P KNVVSWN 
Sbjct: 162 YLYSQCGFLDLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNM 221

Query: 111 LIGRYVKQGDIVAARRVFVEMPERDVISWNSMISGYV 1
           LI RY++ G I  A+ VF EMPERD +SWNSMI+GYV
Sbjct: 222 LIARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYV 258



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 37/141 (26%), Positives = 68/141 (48%)
 Frame = -2

Query: 621 GNLECAQAIFDQTTSKTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLDVKPDSFTYPFVL 442
           G +E A+A+F +   + +  +N+MI  Y Q     + + L+ +M   +V+    T   VL
Sbjct: 230 GKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVL 289

Query: 441 KACGKVSLQRREEEEKDMFEFFVGRKGAEIHCRAFQDGFYSDHFVQNSLIYMYGQCGLID 262
            AC +                 +GRK   IH    Q  +  + ++ N+L+ MY +CG ++
Sbjct: 290 GACAETGALE------------IGRK---IHLSLKQREYKIEGYLSNALVDMYAKCGHLN 334

Query: 261 VSRLVFEEMSQRTVASWNTMI 199
           ++  VF E+  + ++ WN MI
Sbjct: 335 LAWEVFSELKMKHISCWNAMI 355


>ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
           gi|449521725|ref|XP_004167880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 521

 Score =  227 bits (579), Expect = 1e-57
 Identities = 107/217 (49%), Positives = 157/217 (72%)
 Frame = -2

Query: 651 LIFFSALSPSGNLECAQAIFDQTTSKTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLDVK 472
           LI FS+LSP G+L  A A+F +T+   SF+ NTMI+AYS ++FPLK + +YN+M R+DV 
Sbjct: 37  LIAFSSLSPLGSLPHACALFQETSMDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVD 96

Query: 471 PDSFTYPFVLKACGKVSLQRREEEEKDMFEFFVGRKGAEIHCRAFQDGFYSDHFVQNSLI 292
            D FTY FVL+AC + +++  E +++      + RKG+EIH R  + GF  DH VQNSL+
Sbjct: 97  SDHFTYNFVLRACAR-AIKCTEMDDQCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLL 155

Query: 291 YMYGQCGLIDVSRLVFEEMSQRTVASWNTMIAVYDGINDFEAANSLFRLIPEKNVVSWNT 112
            +Y   GL+  +RL+F EM+ +T  SWN M++ Y+ ++D+++A+ L   +P+ N VSWNT
Sbjct: 156 LVYSGSGLVGFARLIFNEMTVKTAVSWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNT 215

Query: 111 LIGRYVKQGDIVAARRVFVEMPERDVISWNSMISGYV 1
           L+ RY++  ++VAAR+VF EMPERDV+SWNS+ISGYV
Sbjct: 216 LLARYIRLNNLVAARKVFEEMPERDVVSWNSIISGYV 252


>ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Glycine max]
          Length = 535

 Score =  227 bits (578), Expect = 2e-57
 Identities = 110/217 (50%), Positives = 152/217 (70%)
 Frame = -2

Query: 651 LIFFSALSPSGNLECAQAIFDQTTSKTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLDVK 472
           LIFFSALSP GNL  A ++F QT+   SF+ NTMI+A++ S +PL+ +++YN MH  +V 
Sbjct: 43  LIFFSALSPMGNLSHAHSLFLQTSMHNSFICNTMIRAFANSSYPLQALYIYNHMHTTNVV 102

Query: 471 PDSFTYPFVLKACGKVSLQRREEEEKDMFEFFVGRKGAEIHCRAFQDGFYSDHFVQNSLI 292
            D FTY FVLKAC +     +E  + D  EF +  KG E+HC   + G   D  +QNSL+
Sbjct: 103 SDHFTYNFVLKACSRAHKFAQEFVKCD--EFIIISKGGEVHCTVLKLGLDQDPSIQNSLL 160

Query: 291 YMYGQCGLIDVSRLVFEEMSQRTVASWNTMIAVYDGINDFEAANSLFRLIPEKNVVSWNT 112
            MY QCGL+ V++ +F+E+S R++ SWN MI+ YD +ND ++A+ L   +P KNVVSWNT
Sbjct: 161 CMYSQCGLVHVAQHLFDEISNRSLVSWNIMISAYDRVNDSKSADYLLESMPHKNVVSWNT 220

Query: 111 LIGRYVKQGDIVAARRVFVEMPERDVISWNSMISGYV 1
           +IGRY++ GDI  ARRVF  MP+RD +SWNS+I+G V
Sbjct: 221 VIGRYIRLGDIEGARRVFQIMPQRDAVSWNSLIAGCV 257


>ref|XP_003607207.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508262|gb|AES89404.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  212 bits (539), Expect = 6e-53
 Identities = 111/220 (50%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
 Frame = -2

Query: 651 LIFFSALSPSGNLECAQAIFDQTTS--KTSFLYNTMIKAYSQSIFPLKGIHLYNQMHRLD 478
           LIFFSALSP GNL  A ++F  ++      F+ NTMI+A+S S FPL+ + +YNQM   +
Sbjct: 44  LIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLINN 103

Query: 477 VKPDSFTYPFVLKACGKVSLQRREEEEKDMFEFFVG-RKGAEIHCRAFQDGFYSDHFVQN 301
           V  DS+T  FVLKAC +     +E    D     V   KG EIHCR  + GF +D  VQN
Sbjct: 104 VVSDSYTCNFVLKACSRAYKLIQESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQN 163

Query: 300 SLIYMYGQCGLIDVSRLVFEEMSQRTVASWNTMIAVYDGINDFEAANSLFRLIPEKNVVS 121
           SL+Y Y QCGL+ V+R +F+++   ++ SWN MI+ YD +ND+E+A+ L  L+P K VVS
Sbjct: 164 SLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVS 223

Query: 120 WNTLIGRYVKQGDIVAARRVFVEMPERDVISWNSMISGYV 1
           WNTLI RY++ GD+ AARRVF  MPER+ +SWNSMI+G V
Sbjct: 224 WNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCV 263