BLASTX nr result

ID: Cimicifuga21_contig00028049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028049
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   160   2e-37
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              160   2e-37
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   154   3e-35
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   141   2e-31

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  160 bits (406), Expect = 2e-37
 Identities = 85/205 (41%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
 Frame = +3

Query: 6    SPLQQDEGSLPLE-KESLPFMKSSNLWGMIESMEIFKLMPQYPHFRLLEKVNEELREGIA 182
            SP     G + L+  +SLPF+KSS +W  +E++E+F+ MPQ PHFR LE   EE REG+A
Sbjct: 1010 SPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLA 1069

Query: 183  MGHMFNFANLMEKTCKAQFDDPRSMFEKMMMALTELEELGFNVQPVRSRLEELLKIKDSY 362
            +G+M  F+ L+EK  K +FDDPRS+F   + AL ELE  GF+ +PV+SR+ EL+ IKD  
Sbjct: 1070 IGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQ 1129

Query: 363  NQLDTKSKTVERELTDGKIRVDEIQESIIRLNTQLQALQTKR-------EMEGFNVAELQ 521
             QL  ++K VE ++ +      +I E I  ++ ++  LQ KR       E +   +A L 
Sbjct: 1130 EQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALL 1189

Query: 522  RTAHAIQKSIQGARYDFDSIVSAPW 596
             +  A+ +SIQ AR DF+ + ++PW
Sbjct: 1190 SSVDAMNESIQSARQDFERVATSPW 1214


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  160 bits (406), Expect = 2e-37
 Identities = 85/205 (41%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
 Frame = +3

Query: 6    SPLQQDEGSLPLE-KESLPFMKSSNLWGMIESMEIFKLMPQYPHFRLLEKVNEELREGIA 182
            SP     G + L+  +SLPF+KSS +W  +E++E+F+ MPQ PHFR LE   EE REG+A
Sbjct: 870  SPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLA 929

Query: 183  MGHMFNFANLMEKTCKAQFDDPRSMFEKMMMALTELEELGFNVQPVRSRLEELLKIKDSY 362
            +G+M  F+ L+EK  K +FDDPRS+F   + AL ELE  GF+ +PV+SR+ EL+ IKD  
Sbjct: 930  IGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQ 989

Query: 363  NQLDTKSKTVERELTDGKIRVDEIQESIIRLNTQLQALQTKR-------EMEGFNVAELQ 521
             QL  ++K VE ++ +      +I E I  ++ ++  LQ KR       E +   +A L 
Sbjct: 990  EQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALL 1049

Query: 522  RTAHAIQKSIQGARYDFDSIVSAPW 596
             +  A+ +SIQ AR DF+ + ++PW
Sbjct: 1050 SSVDAMNESIQSARQDFERVATSPW 1074


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  154 bits (388), Expect = 3e-35
 Identities = 84/198 (42%), Positives = 123/198 (62%), Gaps = 8/198 (4%)
 Frame = +3

Query: 6    SPLQQDEGSLPLE-KESLPFMKSSNLWGMIESMEIFKLMPQYPHFRLLEKVNEELREGIA 182
            SP     G + L+  +SLPF+KSS +W  +E++E+F+ MPQ PHFR LE   EE REG+A
Sbjct: 992  SPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLA 1051

Query: 183  MGHMFNFANLMEKTCKAQFDDPRSMFEKMMMALTELEELGFNVQPVRSRLEELLKIKDSY 362
            +G+M  F+ L+EK  K +FDDPRS+F   + AL ELE  GF+ +PV+SR+ EL+ IKD  
Sbjct: 1052 IGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQ 1111

Query: 363  NQLDTKSKTVERELTDGKIRVDEIQESIIRLNTQLQALQTKR-------EMEGFNVAELQ 521
             QL  ++K VE ++ +      +I E I  ++ ++  LQ KR       E +   +A L 
Sbjct: 1112 EQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALL 1171

Query: 522  RTAHAIQKSIQGARYDFD 575
             +A A+ +SIQ AR DF+
Sbjct: 1172 SSADAMNESIQSARQDFE 1189


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  145 bits (365), Expect = 1e-32
 Identities = 77/193 (39%), Positives = 119/193 (61%), Gaps = 7/193 (3%)
 Frame = +3

Query: 39   LEKESLPFMKSSNLWGMIESMEIFKLMPQYPHFRLLEKVNEELREGIAMGHMFNFANLME 218
            +E + +PF+K S +W  IESME+F+++PQ PHF  L +  EE REG A+G M  FA+L E
Sbjct: 724  VENQLVPFVKKSPVWNTIESMEVFQIIPQKPHFHPLTECKEEYREGSAIGIMVTFASLFE 783

Query: 219  KTCKAQFDDPRSMFEKMMMALTELEELGFNVQPVRSRLEELLKIKDSYNQLDTKSKTVER 398
            K    QFDD RS+ E  + +L +LE+ GF++   R RL ELL IKD   ++  +SK  E 
Sbjct: 784  KISSLQFDDCRSILESTLESLVDLEKHGFDITVPRCRLNELLSIKDGQGEVINESKDAEE 843

Query: 399  EL---TDGKIRVDE----IQESIIRLNTQLQALQTKREMEGFNVAELQRTAHAIQKSIQG 557
            ++   TD K +++E    I++ I  L  +L   + K +++G +++++Q  A AI + I+ 
Sbjct: 844  KIRVHTDEKRKLEEKMSDIEKKITELQEELALTKAKMDVKGLDISKMQSHADAINERIKN 903

Query: 558  ARYDFDSIVSAPW 596
            AR  F  + SAPW
Sbjct: 904  ARDHFVKVASAPW 916


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
            gi|223545236|gb|EEF46744.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 689

 Score =  141 bits (355), Expect = 2e-31
 Identities = 78/205 (38%), Positives = 120/205 (58%), Gaps = 7/205 (3%)
 Frame = +3

Query: 3    SSPLQQDEGSLPLEKESLPFMKSSNLWGMIESMEIFKLMPQYPHFRLLEKVNEELREGIA 182
            SS +   E +  +E   +PF+KSS +W  IES+E+F+++PQ PHF  L    E  REG+A
Sbjct: 485  SSVINVPEATELVEDLEMPFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREGMA 544

Query: 183  MGHMFNFANLMEKTCKAQFDDPRSMFEKMMMALTELEELGFNVQPVRSRLEELLKIKDSY 362
            MGHM +FA L+EK  K + DD R +FE  M  L ELE  GF V+ +  RLE+LL IKD  
Sbjct: 545  MGHMLSFAVLIEKMSKLRVDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKDRC 604

Query: 363  NQLDTKSKTVERELTDGKIR-------VDEIQESIIRLNTQLQALQTKREMEGFNVAELQ 521
             +L+ ++K V   + +GK         +D+I+E I +L  Q     + + M+   +  LQ
Sbjct: 605  KRLEDEAKKVHIGMAEGKNEKIKLEEDIDKIEERISQLEEQRAMKVSMKMMKDSELITLQ 664

Query: 522  RTAHAIQKSIQGARYDFDSIVSAPW 596
              A+A+ + I    ++F+++ +APW
Sbjct: 665  VNANAVNEDIVNMEHEFENVAAAPW 689


Top