BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028030
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                192   2e-47
ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205...   190   1e-46
gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subc...   189   2e-46
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   189   2e-46
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   189   2e-46

>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  192 bits (488), Expect = 2e-47
 Identities = 89/114 (78%), Positives = 98/114 (85%)
 Frame = +3

Query: 3   FIRPSTSPWGAPAIFVSKKDGSLRMCIDYRELNKVTIKNKYPLPRIDDLLDQLKGASVFS 182
           +IRPS SPWGAP +FV KKDGS+R+CIDYRELN VTIKNKYPLPRIDDL DQL GASVFS
Sbjct: 588 YIRPSASPWGAPVLFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLNGASVFS 647

Query: 183 QFDLRTGYHQMGVEPTSIPKTAFRTRYGLYEFPVMPFRLTNAPAFFMDLMNRLF 344
           + DLR+GYHQ+ V    +PKTAFRTRYG YEF VMPF LTNAPA FMDLMNR+F
Sbjct: 648 KIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNAPAIFMDLMNRIF 701


>ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205308, partial [Cucumis
           sativus]
          Length = 768

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/114 (77%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   FIRPSTSPWGAPAIFVSKKDGSLRMCIDYRELNKVTIKNKYPLPRIDDLLDQLKGASVFS 182
           FIRPS SPWGAP +FV KKDGS+R+CIDYRELNKVTIKN YPLPRIDDL DQL+GA+VFS
Sbjct: 561 FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFDQLQGATVFS 620

Query: 183 QFDLRTGYHQMGVEPTSIPKTAFRTRYGLYEFPVMPFRLTNAPAFFMDLMNRLF 344
           + DLR+GYHQ+ +  + IPKTAFR+RYG YEF VMPF LTNAPA FMDLMNR+F
Sbjct: 621 KIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFMVMPFGLTNAPAVFMDLMNRVF 674


>gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1407

 Score =  189 bits (480), Expect = 2e-46
 Identities = 85/114 (74%), Positives = 99/114 (86%)
 Frame = +3

Query: 3   FIRPSTSPWGAPAIFVSKKDGSLRMCIDYRELNKVTIKNKYPLPRIDDLLDQLKGASVFS 182
           F+RPS+SPWGAP +FV KKDGS+RMC+DYR LN+VTIKNKYPLPRIDDL DQLKGA VFS
Sbjct: 570 FVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFS 629

Query: 183 QFDLRTGYHQMGVEPTSIPKTAFRTRYGLYEFPVMPFRLTNAPAFFMDLMNRLF 344
           + DLR+GYHQ+ +    IPKTAF TRYGLYEF VM F LTNAPA+FM+LMN++F
Sbjct: 630 KIDLRSGYHQLNIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVF 683


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score =  189 bits (480), Expect = 2e-46
 Identities = 87/114 (76%), Positives = 99/114 (86%)
 Frame = +3

Query: 3   FIRPSTSPWGAPAIFVSKKDGSLRMCIDYRELNKVTIKNKYPLPRIDDLLDQLKGASVFS 182
           FI PS SPWGAP +FV KKDGSLR+C DYRELNKVTIKNKYPLPRIDDL DQL+GA VFS
Sbjct: 524 FIHPSVSPWGAPVLFVKKKDGSLRLCTDYRELNKVTIKNKYPLPRIDDLFDQLQGARVFS 583

Query: 183 QFDLRTGYHQMGVEPTSIPKTAFRTRYGLYEFPVMPFRLTNAPAFFMDLMNRLF 344
           + DL++GYHQ+ ++P+ IPKTAFR RYG YE+ VMPF LTNAPA FMDLMNR+F
Sbjct: 584 KIDLQSGYHQLKIKPSDIPKTAFRARYGHYEYLVMPFGLTNAPAAFMDLMNRIF 637


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  189 bits (480), Expect = 2e-46
 Identities = 85/114 (74%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   FIRPSTSPWGAPAIFVSKKDGSLRMCIDYRELNKVTIKNKYPLPRIDDLLDQLKGASVFS 182
           +IRPS+SPWGAP +FV KKD S+RMC+DYR LN+VTIKNKYPLPRIDDL DQLKGASVFS
Sbjct: 152 YIRPSSSPWGAPVLFVKKKDNSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGASVFS 211

Query: 183 QFDLRTGYHQMGVEPTSIPKTAFRTRYGLYEFPVMPFRLTNAPAFFMDLMNRLF 344
           + DLR+GYHQ+ + P  IPKTAF TRYGLYEF VM F LTNAPA+FM++MN++F
Sbjct: 212 KIDLRSGYHQLKIRPEDIPKTAFTTRYGLYEFTVMSFGLTNAPAYFMNMMNKVF 265