BLASTX nr result
ID: Cimicifuga21_contig00028009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00028009
(400 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 83 4e-24
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera] 90 5e-24
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 90 5e-24
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] 90 5e-24
ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [S... 90 7e-24
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 82.8 bits (203), Expect(3) = 4e-24
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 28 SVGYLGHVISVPGVAVDDDNIRSILDWPVPCSLKASRGFLGLTGYYHKFVEGYGKISAPL 207
+V YLGH+IS GVAVD + S+ WP+P ++K RGFLGLT YY KF++ YGKI+ PL
Sbjct: 577 TVEYLGHLISKEGVAVDPSKVVSVTRWPIPKNVKGVRGFLGLTDYYRKFIKDYGKIAKPL 636
Query: 208 TQLLEK 225
T+L +K
Sbjct: 637 TELTKK 642
Score = 49.3 bits (116), Expect(3) = 4e-24
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 219 REIFLCNEQATAAFAQLKSPLTSTTVPKLPSFSKEFCLECDASG 350
++ F+ NE+ AF QLK LT++ V LP F+KEF +ECDASG
Sbjct: 642 KDAFMWNEKTQDAFDQLKRRLTTSPVLALPDFNKEFVIECDASG 685
Score = 24.3 bits (51), Expect(3) = 4e-24
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2
Query: 350 GGLGSVLMQGGRQLAYF 400
GG+G++LMQ + +AY+
Sbjct: 686 GGIGAILMQDRKPVAYY 702
>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 89.7 bits (221), Expect(3) = 5e-24
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1
Query: 25 SSVGYLGHVISVPGVAVDDDNIRSILDWPVPCSLKASRGFLGLTGYYHKFVEGYGKISAP 204
S + YLGH+IS GV D I ++L+WP P SLK+ RGFLGLTGYY KF++GYG I+AP
Sbjct: 711 SEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAP 770
Query: 205 LTQLLEK 225
LT LL+K
Sbjct: 771 LTALLKK 777
Score = 40.4 bits (93), Expect(3) = 5e-24
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 213 IAREIFLCNEQATAAFAQLKSPLTSTTVPKLPSFSKEFCLECDASGVV*GLFL 371
+ + F E A AF LK +TS V LP FS F ++CDASG+ G L
Sbjct: 775 LKKNSFKWTESAKKAFQDLKHAVTSPPVLALPDFSIPFTIQCDASGIGVGAVL 827
Score = 25.8 bits (55), Expect(3) = 5e-24
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 353 GLGSVLMQGGRQLAY 397
G+G+VLMQ GR LAY
Sbjct: 822 GVGAVLMQQGRPLAY 836
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 89.7 bits (221), Expect(3) = 5e-24
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1
Query: 25 SSVGYLGHVISVPGVAVDDDNIRSILDWPVPCSLKASRGFLGLTGYYHKFVEGYGKISAP 204
S + YLGH+IS GV D I ++L+WP P SLK+ RGFLGLTGYY KF++GYG I+AP
Sbjct: 758 SEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAP 817
Query: 205 LTQLLEK 225
LT LL+K
Sbjct: 818 LTALLKK 824
Score = 40.4 bits (93), Expect(3) = 5e-24
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 213 IAREIFLCNEQATAAFAQLKSPLTSTTVPKLPSFSKEFCLECDASGVV*GLFL 371
+ + F E A AF LK +TS V LP FS F ++CDASG+ G L
Sbjct: 822 LKKNSFKWTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVL 874
Score = 25.8 bits (55), Expect(3) = 5e-24
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 353 GLGSVLMQGGRQLAY 397
G+G+VLMQ GR LAY
Sbjct: 869 GVGAVLMQQGRPLAY 883
>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 89.7 bits (221), Expect(3) = 5e-24
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1
Query: 25 SSVGYLGHVISVPGVAVDDDNIRSILDWPVPCSLKASRGFLGLTGYYHKFVEGYGKISAP 204
S + YLGH+IS GV D I ++L+WP P SLK+ RGFLGLTGYY KF++GYG I+AP
Sbjct: 725 SEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAP 784
Query: 205 LTQLLEK 225
LT LL+K
Sbjct: 785 LTXLLKK 791
Score = 40.4 bits (93), Expect(3) = 5e-24
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 213 IAREIFLCNEQATAAFAQLKSPLTSTTVPKLPSFSKEFCLECDASGVV*GLFL 371
+ + F E A AF LK +TS V LP FS F ++CDASG+ G L
Sbjct: 789 LKKNSFKWTESAKRAFQDLKHAVTSPPVLALPDFSIPFTIQCDASGIGVGAVL 841
Score = 25.8 bits (55), Expect(3) = 5e-24
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 353 GLGSVLMQGGRQLAY 397
G+G+VLMQ GR LAY
Sbjct: 836 GVGAVLMQQGRPLAY 850
>ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
gi|241916679|gb|EER89823.1| hypothetical protein
SORBIDRAFT_10g020014 [Sorghum bicolor]
Length = 1414
Score = 90.1 bits (222), Expect(3) = 7e-24
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +1
Query: 25 SSVGYLGHVISVPGVAVDDDNIRSILDWPVPCSLKASRGFLGLTGYYHKFVEGYGKISAP 204
SSV YLGH IS GVA+D +++I DWPVP S +A RGFLGL GYY KF+ YG ++AP
Sbjct: 621 SSVAYLGHTISAAGVAMDSAKVQAIRDWPVPRSARAVRGFLGLAGYYRKFIHNYGAMAAP 680
Query: 205 LTQLLEK 225
LT LL+K
Sbjct: 681 LTSLLKK 687
Score = 42.7 bits (99), Expect(3) = 7e-24
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +3
Query: 213 IAREIFLCNEQATAAFAQLKSPLTSTTVPKLPSFSKEFCLECDAS 347
+ +E F N +A AAF LK+ +T+ V +P F+K F +ECDAS
Sbjct: 685 LKKEGFSWNAEAAAAFEDLKTAVTAAPVLAMPDFAKPFVVECDAS 729
Score = 22.7 bits (47), Expect(3) = 7e-24
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 353 GLGSVLMQGGRQLAYF 400
G G+VL+Q G +A+F
Sbjct: 732 GFGAVLLQDGHPIAFF 747