BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00028001
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   168   3e-39
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   115   2e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   113   9e-23
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   109   2e-21
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    108   3e-21

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  168 bits (425), Expect = 3e-39
 Identities = 117/389 (30%), Positives = 185/389 (47%), Gaps = 21/389 (5%)
 Frame = -1

Query: 1212 VTRDWSYTPQDILKMIVELL-SIDDYVRFGAVCKSWLSVIVDQGRYNFSRKILPWLMFPR 1036
            V  DWS  P D LK+I E L S++DYVRFG VCKSW S+  D+     S K  PWLM   
Sbjct: 918  VMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PWLMLAE 976

Query: 1035 GNDNDIHDFWN---NKVHRLNLEGVSKCCCFGSPYSWLVLFHNGM-LEILNXXXXXXXXX 868
              +++I  F++    KV+ + L  V    C+GSPY WLV     + + +LN         
Sbjct: 977  KENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILL 1036

Query: 867  XXXXSFDNCKIRVSHG----------FHKVVLVTSPSTRADDQFLVFVVFNLDGKVAFAR 718
                +  N    +              +K VL ++PS+       V ++++  G++AF +
Sbjct: 1037 PSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS---PDCAVMIIYSDYGRLAFTK 1093

Query: 717  PRNRAWTTINMDRTMIDDIVHFNNQFYMVDTECVVWCFNITRPTPIGTQFVLPPP----H 550
            P ++ WT +  +   +DDI++FN  F  V+    VW  +I+       +F   P      
Sbjct: 1094 PGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVD 1153

Query: 549  NVKYLDRTFYLVELLGQMHMVVKYSSYECLSMAHHFEPGSRPFEDDYMHYFRVFKLHFHT 370
             ++Y  +  YLVE  G+++MV +          + ++   R         F V KL    
Sbjct: 1154 EIEYEAK--YLVESGGEIYMVTR----------NLYDTARRDIPYMRTWTFSVLKLDMCN 1201

Query: 369  TELEEIDTLGDYAIFVGHNTSFSLLASDYPQCKSSCIYFTDH--RMVDLSSTGNIGIFNL 196
               EE++ L   + F+G+N SFS  ASDYP+ + + IYFTD     +++    ++GI+N 
Sbjct: 1202 KRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNF 1261

Query: 195  VTEGLETLYTGDDDESLYSLPVWFTPSLC 109
                +E    G D  S++S P+W  PS C
Sbjct: 1262 QNTQIEHYPVGHDALSMFSAPLWIRPSFC 1290


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  115 bits (288), Expect = 2e-23
 Identities = 112/413 (27%), Positives = 185/413 (44%), Gaps = 48/413 (11%)
 Frame = -1

Query: 1203 DWSYTPQDILKMIVELLSI-DDYVRFGAVCKSWLSVIVDQGRYNFSRKILPWLMFPRGND 1027
            DWS  P +++++I + L+I  DY+   AVC +W   I      N     LPWLM P+   
Sbjct: 4    DWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTP--NHLPPQLPWLMLPQSQS 61

Query: 1026 ND------IHDFWNNKVHRLNLEGVS--KCCCFGSPYSWLVLFHNG-MLEILNXXXXXXX 874
                          NK H LNL  VS  K  C GS + WL++  +   + ++N       
Sbjct: 62   QSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHC-GSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 873  XXXXXXSFDNC--------------------KIRVS------HGFHKVVLVTSPSTRADD 772
                  SF N                     ++ VS          KVVL +SP    D+
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLK--DN 178

Query: 771  QFLVFVVFNLDGKVAFARPRNRAWTTINMDRTMIDDIVHFNNQFYMVDTECVVWCFNITR 592
             F+V  + N    +A+ R  +++W+ +   R+  +D++  N  FY V+    +   +I+ 
Sbjct: 179  NFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISS 238

Query: 591  PTPIGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYSSYECLSMAHHFEPGSRPFEDD 412
             +P    F+  P      +    YLV    ++ +V +Y     L + + F+    P  + 
Sbjct: 239  DSP-RVSFMETPRQAGGDMQ---YLVNSGDELLLVTRY-----LDLEYEFD---HPDMEP 286

Query: 411  YMHY----FRVFKLHFHTTELEEIDTLGDYAIFVGHNTSFSLLASDYPQCKSSCIYFTDH 244
            ++ Y    F VF+L ++  +   + TLGD A+F+G N+S SL A+D+  C  +CIY+TD 
Sbjct: 287  HLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD 346

Query: 243  RMVDLSSTG-----NIGIFNLVTEGLETL--YTGDDDESL-YSLPVWFTPSLC 109
              +D +  G     ++GIF L  E +E L  Y  +    L +S P+W +P+ C
Sbjct: 347  -YLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNPC 398


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  113 bits (283), Expect = 9e-23
 Identities = 104/402 (25%), Positives = 173/402 (43%), Gaps = 37/402 (9%)
 Frame = -1

Query: 1203 DWSYTPQDILKMIVELLSI-DDYVRFGAVCKSWLSVIVDQGRYNFSRKILPWLMFPRGND 1027
            DWS    ++L  I +   I  DYVRF AVC +W + +     +  ++  LPWLM P+   
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQ--LPWLMLPQSQP 60

Query: 1026 NDIH-DFWN---NKVHRLNL-EGVSKCCCFGSPYSWLVLFHNGM-LEILNXXXXXXXXXX 865
            +  H  F++   NK H L L E   +    GS + WL++      + +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 864  XXXSFDNC------------KIRVSHG--------------FHKVVLVTSPSTRADDQFL 763
               +F N              +R S G                K +L +SP+  +D  F+
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD--FI 178

Query: 762  VFVVFNLDGKVAFARPRNRAWTTINMDRTMIDDIVHFNNQFYMVDTECVVWCFNITRPTP 583
              V+ N  G +A  R  + +WT +   ++  +D++     FY V+    +   +++  +P
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSP 238

Query: 582  IGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYSSYECLSMAHHFEPGSRPFEDDYMH 403
              +   +P     ++     YLVE   ++ +V +Y     L + +  EP           
Sbjct: 239  RVSIIEMPQ----QFGGDLQYLVESGEELLLVTRY-----LDLTYDVEPDQTSLIYRTTR 289

Query: 402  YFRVFKLHFHTTELEEIDTLGDYAIFVGHNTSFSLLASDYPQCKSSCIYFTDHRMVD--- 232
             F+V +L       E + +LGD A+F+G N S SL + D+P CK +CIY+TD    D   
Sbjct: 290  -FQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYD 348

Query: 231  -LSSTGNIGIFNLVTEGLETLYTGDDDESLYSLPVWFTPSLC 109
             +    ++GIFNL    +E L         +  P+W TP+ C
Sbjct: 349  GIGGEQDLGIFNLEDGSIEPL-PCSHFRIRWPPPLWVTPNPC 389


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  109 bits (272), Expect = 2e-21
 Identities = 103/402 (25%), Positives = 172/402 (42%), Gaps = 37/402 (9%)
 Frame = -1

Query: 1203 DWSYTPQDILKMIVELLSI-DDYVRFGAVCKSWLSVIVDQGRYNFSRKILPWLMFPRGND 1027
            DWS    ++L  I +   I  DYVRF AVC +W + +     +  ++  LPWLM P+   
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQ--LPWLMLPQSQP 60

Query: 1026 NDIH-DFWN---NKVHRLNL-EGVSKCCCFGSPYSWLVLFHNGM-LEILNXXXXXXXXXX 865
            +  H  F++   NK H L L E   +    GS + WL++      + +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 864  XXXSFDNC------------KIRVSHG--------------FHKVVLVTSPSTRADDQFL 763
               +F N              +R S G                K +L +SP+  +D  F+
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD--FI 178

Query: 762  VFVVFNLDGKVAFARPRNRAWTTINMDRTMIDDIVHFNNQFYMVDTECVVWCFNITRPTP 583
              V+ N  G +A  R  + +WT +   ++  +D++     FY V+    +   +++  +P
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSP 238

Query: 582  IGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYSSYECLSMAHHFEPGSRPFEDDYMH 403
              +   +P     ++     YLVE   ++ +V +Y     L + +  E            
Sbjct: 239  RVSIIEMPQ----QFGGDLQYLVESGEELLLVTRY-----LDLTYDVEXDQTSLIYRTTR 289

Query: 402  YFRVFKLHFHTTELEEIDTLGDYAIFVGHNTSFSLLASDYPQCKSSCIYFTDHRMVD--- 232
             F+V +L       E + +LGD A+F+G N S SL + D+P CK +CIY+TD    D   
Sbjct: 290  -FQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYD 348

Query: 231  -LSSTGNIGIFNLVTEGLETLYTGDDDESLYSLPVWFTPSLC 109
             +    ++GIFNL    +E L         +  P+W TP+ C
Sbjct: 349  GIGGEQDLGIFNLEDGSIEPL-PCSHFRIRWPPPLWVTPNPC 389


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  108 bits (270), Expect = 3e-21
 Identities = 111/417 (26%), Positives = 186/417 (44%), Gaps = 52/417 (12%)
 Frame = -1

Query: 1203 DWSYTPQDILKMIVELLSI-DDYVRFGAVCKSWLSVIVDQGRYNFSRKI---LPWLMFPR 1036
            DW+  P D+L+ I + L++  DY+RF  VC+SW S +          ++   LP L+ P 
Sbjct: 3    DWTELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVP-----KIPHRLPPQLPCLIIPL 57

Query: 1035 GNDN--DIHDFWNNKVHRLNLEGVS--KCCCFGSPYSWL-VLFHNGMLEILNXXXXXXXX 871
             +D    + +F +NK+H L L   S  K  C GS + WL +L     + +LN        
Sbjct: 58   YHDCRCGLFNFSDNKIHFLYLPEASLRKRPC-GSSHGWLTILDETPSILLLNPLTRAKFR 116

Query: 870  XXXXXSFDNCK------------IRVSHGF--------------HKVVLVTSPSTRADDQ 769
                 +F N              IR   G                K+VL +SPS + D  
Sbjct: 117  LPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQND-- 174

Query: 768  FLVFVVFNLDGKVAFARPRNRAWTTINMDRTMIDDIVHFNNQFYMVDTECVVWCFNI--- 598
            FL   + N  G +AF R    +WT ++   +  +D+++ +  FY VD   VV   ++   
Sbjct: 175  FLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGS 234

Query: 597  -TRPTPIGTQFVLPPPHNVKYLDRTFYLVELLGQMHMVVKYSSYECLSMAHHFEPGSRPF 421
             ++ + + T+  L    +++YL R       LGQ          E L ++ + +  +   
Sbjct: 235  RSQVSLVATERQLAG--DIQYLVR-------LGQ----------ELLLVSRYLDIVNDGM 275

Query: 420  EDDYMHY------FRVFKLHFHTTELEEIDTLGDYAIFVGHNTSFSLLASDYPQCKSSCI 259
            +D+ +        F VF++ +     E+++ L + A+FVG N+S +  A+D+ +   +CI
Sbjct: 276  DDELISVMYRTVRFEVFRMEWEGPRWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCI 335

Query: 258  YFT-DHRMVDLSSTG---NIGIFNLVTEGLETL--YTGDDDESLYSL-PVWFTPSLC 109
            Y+T D+   D    G   ++GIF L  E  E L  Y+G        L P+W TP+ C
Sbjct: 336  YYTDDYSDSDYQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392