BLASTX nr result

ID: Cimicifuga21_contig00027469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027469
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]        151   5e-35
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g...   149   3e-34
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo...   149   3e-34

>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  166 bits (420), Expect = 2e-39
 Identities = 73/104 (70%), Positives = 92/104 (88%)
 Frame = +2

Query: 11   FVNGDKTQDQIEEVYTTLKEFHGRLREAGYVPDTNFVLHDVEEEQKENALLYHSEKLAIA 190
            FV GD+T DQIEE+Y+ LKE++G  R  GY+PDTNFVLHDVEEEQK+N LLYHSEKLA+ 
Sbjct: 938  FVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVV 997

Query: 191  YGLLNTPHQTPIQIMKNLRICGDCHSFTKFLSKITQREIVIRDG 322
            +G+L+TP+ +PIQI+KNLRICGDCH+F KF+SK+T R+I+IRDG
Sbjct: 998  FGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDG 1041


>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = +2

Query: 11   FVNGDKTQDQIEEVYTTLKEFHGRLREAGYVPDTNFVLHDVEEEQKENALLYHSEKLAIA 190
            FV GD+  +QI+ +Y TL E +  L+  GYVPDT+FVLHD++EEQKE++LLYHSEKLA+A
Sbjct: 801  FVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVA 860

Query: 191  YGLLNTPHQTPIQIMKNLRICGDCHSFTKFLSKITQREIVIRDG 322
            YGLL TP   PIQIMKNLRICGDCH+F KF+S +T+REI +RDG
Sbjct: 861  YGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDG 904


>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Brachypodium distachyon]
          Length = 921

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/104 (67%), Positives = 86/104 (82%)
 Frame = +2

Query: 11   FVNGDKTQDQIEEVYTTLKEFHGRLREAGYVPDTNFVLHDVEEEQKENALLYHSEKLAIA 190
            FV GDK  ++IEE+  TL++ +  LR  GYVPDT FVLHD++EEQKE++LLYHSEKLA+A
Sbjct: 801  FVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVA 860

Query: 191  YGLLNTPHQTPIQIMKNLRICGDCHSFTKFLSKITQREIVIRDG 322
            YGLL TP   PIQIMKNLRICGDCH+F KF+S +T+R+I IRDG
Sbjct: 861  YGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDG 904


>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
            gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|218190072|gb|EEC72499.1| hypothetical protein
            OsI_05871 [Oryza sativa Indica Group]
            gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
            Japonica Group]
          Length = 922

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/104 (66%), Positives = 85/104 (81%)
 Frame = +2

Query: 11   FVNGDKTQDQIEEVYTTLKEFHGRLREAGYVPDTNFVLHDVEEEQKENALLYHSEKLAIA 190
            FV GDK  +QIEE+  TL+E +  L+  GYVPDT FVLHD++EEQKE++LLYHSEKLA+A
Sbjct: 802  FVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVA 861

Query: 191  YGLLNTPHQTPIQIMKNLRICGDCHSFTKFLSKITQREIVIRDG 322
            Y LL TP   PIQI+KNLRICGDCH+F KF+S +T+R+I IRDG
Sbjct: 862  YCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDG 905


>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/104 (66%), Positives = 85/104 (81%)
 Frame = +2

Query: 11   FVNGDKTQDQIEEVYTTLKEFHGRLREAGYVPDTNFVLHDVEEEQKENALLYHSEKLAIA 190
            FV GDK  +QIEE+  TL+E +  L+  GYVPDT FVLHD++EEQKE++LLYHSEKLA+A
Sbjct: 802  FVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVA 861

Query: 191  YGLLNTPHQTPIQIMKNLRICGDCHSFTKFLSKITQREIVIRDG 322
            Y LL TP   PIQI+KNLRICGDCH+F KF+S +T+R+I IRDG
Sbjct: 862  YCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDG 905


Top