BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027444
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX94970.1| retrotransposon protein, putative, unclassified [...    91   7e-17
gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japo...    91   7e-17
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    88   6e-16
gb|EAY96391.1| hypothetical protein OsI_18290 [Oryza sativa Indi...    86   2e-15
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    79   5e-13

>gb|AAX94970.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77550533|gb|ABA93330.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 816

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
 Frame = -2

Query: 464 WLVGQGFALNAWKDHWISGSXXXXXXXXXXPDCVLTHVVDFIDPVSRSWKMDLVRQWWPQ 285
           W +G+G  L+ W+D+WI               C L  V D + P ++ W   L+RQ +  
Sbjct: 194 WRIGKGDQLHIWRDNWIPRDHQLRVTGKRTRTC-LKWVADLVSPNNQEWDEGLIRQIFYP 252

Query: 284 DFVGRIGKLPLQRFPEQDEMVWNPSKYGEFTVKSCYKL-LTQFH--------FSHWQVKR 132
            +V  I K+ L   P  D + W+P + G FTV+S YKL L + H         S+    R
Sbjct: 253 PYVDEILKIKLPESPTDDFLAWHPERLGVFTVRSAYKLGLAEEHRANEAGACSSNGNGDR 312

Query: 131 KWIKNLWKIKVPHKICFFLWQIANHKLPIAMLLVERGLV 15
              KN+W  +VP K+C F W++A  +LP      +R +V
Sbjct: 313 VLWKNIWSAQVPQKVCIFAWRLAVERLPTQHNKQKRNIV 351


>gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japonica Group]
          Length = 653

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
 Frame = -2

Query: 464 WLVGQGFALNAWKDHWISGSXXXXXXXXXXPDCVLTHVVDFIDPVSRSWKMDLVRQWWPQ 285
           W +G+G  L+ W+D+WI               C L  V D + P ++ W   L+RQ +  
Sbjct: 194 WRIGKGDQLHIWRDNWIPRDHQLRVTGKRTRTC-LKWVADLVSPNNQEWDEGLIRQIFYP 252

Query: 284 DFVGRIGKLPLQRFPEQDEMVWNPSKYGEFTVKSCYKL-LTQFH--------FSHWQVKR 132
            +V  I K+ L   P  D + W+P + G FTV+S YKL L + H         S+    R
Sbjct: 253 PYVDEILKIKLPESPTDDFLAWHPERLGVFTVRSAYKLGLAEEHRANEAGACSSNGNGDR 312

Query: 131 KWIKNLWKIKVPHKICFFLWQIANHKLPIAMLLVERGLV 15
              KN+W  +VP K+C F W++A  +LP      +R +V
Sbjct: 313 VLWKNIWSAQVPQKVCIFAWRLAVERLPTQHNKQKRNIV 351


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/149 (32%), Positives = 71/149 (47%)
 Frame = -2

Query: 464  WLVGQGFALNAWKDHWISGSXXXXXXXXXXPDCVLTHVVDFIDPVSRSWKMDLVRQWWPQ 285
            W +GQG ++N W + W+S S                 V D I    +SW ++ +R+  PQ
Sbjct: 859  WSIGQGDSINVWTEAWLSPSSPQTPIGPPTETNKDLSVHDLICHDVKSWNVEAIRKHLPQ 918

Query: 284  DFVGRIGKLPLQRFPEQDEMVWNPSKYGEFTVKSCYKLLTQFHFSHWQVKRKWIKNLWKI 105
             +  +I K+ +   P QD +VW P K GE+T K+ Y L     F   Q+   W KN+WKI
Sbjct: 919  -YEDQIRKITINALPLQDSLVWLPVKSGEYTTKTGYALAKLNSFPASQLDFNWQKNIWKI 977

Query: 104  KVPHKICFFLWQIANHKLPIAMLLVERGL 18
                K+  FLW+     LP+   L  R +
Sbjct: 978  HTSPKVKHFLWKAMKGALPVGEALSRRNI 1006


>gb|EAY96391.1| hypothetical protein OsI_18290 [Oryza sativa Indica Group]
          Length = 653

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
 Frame = -2

Query: 464 WLVGQGFALNAWKDHWISGSXXXXXXXXXXPDCVLTHVVDFIDPVSRSWKMDLVRQWWPQ 285
           W +G+G  L+ W+D+WI                 L  V D + P ++ W   L+RQ +  
Sbjct: 194 WRIGKGDQLHIWRDNWIPRDHQLRVTGKRTRTR-LKWVADLVKPNNQEWDEGLIRQIFCP 252

Query: 284 DFVGRIGKLPLQRFPEQDEMVWNPSKYGEFTVKSCYKL-LTQFH--------FSHWQVKR 132
            +V  I K+ L   P  D + W+P + G FTV+S YKL L + H         S+    R
Sbjct: 253 PYVDEILKIKLPESPTDDFLAWHPERLGVFTVRSAYKLGLAEEHRANEAGACSSNGNGDR 312

Query: 131 KWIKNLWKIKVPHKICFFLWQIANHKLPIAMLLVERGLV 15
              KN+W  +VP K+C F W++A  +LP      +R +V
Sbjct: 313 VLWKNIWSAQVPQKVCIFAWRLAVERLPTQHNKQKRNIV 351


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
 Frame = -2

Query: 464 WLVGQGFALNAWKDHWISGSXXXXXXXXXXPDCVLTHVVDFIDPVSRSWKMDLVRQ-WWP 288
           W VG G A+N W D WI              + V T V + IDP + SW ++L+ Q +WP
Sbjct: 162 WRVGNGAAINIWSDPWIPSDHTRRPITPRGRNLV-TRVEELIDPSTGSWDVELLTQTFWP 220

Query: 287 QDFVGRIGKLPLQRFPEQDEMV-WNPSKYGEFTVKSCYKLLTQFHF----------SHWQ 141
           +D V  I  +P+    E D+M+ W+  + G F+VKS YK+                S+  
Sbjct: 221 ED-VNMIRTIPVHI--EMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGS 277

Query: 140 VKRK-WIKNLWKIKVPHKICFFLWQIANHKLPIAMLLVERGLVVD 9
            +R+ + K +WK+++P K+  F+W+ +++ L + + L +RG+ +D
Sbjct: 278 TEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLD 322