BLASTX nr result

ID: Cimicifuga21_contig00027438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027438
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304797.1| multidrug resistance protein ABC transporter...   114   1e-34
ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3...   114   1e-34
ref|XP_002468061.1| hypothetical protein SORBIDRAFT_01g038915 [S...   107   4e-32
ref|XP_002457259.1| hypothetical protein SORBIDRAFT_03g004300 [S...   107   6e-32
ref|NP_001042159.1| Os01g0173900 [Oryza sativa Japonica Group] g...   106   1e-31

>ref|XP_002304797.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222842229|gb|EEE79776.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1456

 Score =  114 bits (286), Expect(2) = 1e-34
 Identities = 59/78 (75%), Positives = 69/78 (88%)
 Frame = -1

Query: 237  TDNLIQQTLSQHFSNSTVITIAHRITSVLDSNMVLLLDHGLILEYDSPSKLLENKSSLFA 58
            TDNLIQQTL Q+FS+ TVITIAHRITSVLDS+MVLLL  GLI EY+SP++LLENKSS F+
Sbjct: 1375 TDNLIQQTLRQNFSDCTVITIAHRITSVLDSDMVLLLSQGLIEEYNSPTRLLENKSSSFS 1434

Query: 57   KLVAEYTVRSRSSFDNST 4
            +LVAEYTVRS + F+ ST
Sbjct: 1435 QLVAEYTVRSNTRFEKST 1452



 Score = 57.0 bits (136), Expect(2) = 1e-34
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 319  WSMGQRQLVCLGRVLLKRSQVLVLDEAN*QLDSA 218
            WSMGQRQLVCLGRVLLK+S+VLVLDEA   +D+A
Sbjct: 1341 WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTA 1374


>ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1494

 Score =  114 bits (285), Expect(2) = 1e-34
 Identities = 59/77 (76%), Positives = 67/77 (87%)
 Frame = -1

Query: 237  TDNLIQQTLSQHFSNSTVITIAHRITSVLDSNMVLLLDHGLILEYDSPSKLLENKSSLFA 58
            TDNLIQQTL Q FS STVITIAHRITSVL S+MVLLL  GLI EYD+P++L+ENKSS FA
Sbjct: 1415 TDNLIQQTLRQQFSGSTVITIAHRITSVLHSDMVLLLSQGLIEEYDTPTRLIENKSSSFA 1474

Query: 57   KLVAEYTVRSRSSFDNS 7
            +LVAEYT+RS SSF+ S
Sbjct: 1475 QLVAEYTMRSNSSFEKS 1491



 Score = 57.0 bits (136), Expect(2) = 1e-34
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 319  WSMGQRQLVCLGRVLLKRSQVLVLDEAN*QLDSA 218
            WSMGQRQLVCLGRVLLK+S+VLVLDEA   +D+A
Sbjct: 1381 WSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTA 1414


>ref|XP_002468061.1| hypothetical protein SORBIDRAFT_01g038915 [Sorghum bicolor]
           gi|241921915|gb|EER95059.1| hypothetical protein
           SORBIDRAFT_01g038915 [Sorghum bicolor]
          Length = 113

 Score =  107 bits (268), Expect(2) = 4e-32
 Identities = 54/70 (77%), Positives = 65/70 (92%)
 Frame = -1

Query: 237 TDNLIQQTLSQHFSNSTVITIAHRITSVLDSNMVLLLDHGLILEYDSPSKLLENKSSLFA 58
           TDNLIQ+TL Q FS +TVITIAHRITSVLDS+MVLLLD+G+ +E+D P+KLLE+KSSLF+
Sbjct: 41  TDNLIQKTLRQQFSETTVITIAHRITSVLDSDMVLLLDNGVAVEHDRPTKLLEDKSSLFS 100

Query: 57  KLVAEYTVRS 28
           KLVAEYT+RS
Sbjct: 101 KLVAEYTMRS 110



 Score = 55.5 bits (132), Expect(2) = 4e-32
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -3

Query: 319 WSMGQRQLVCLGRVLLKRSQVLVLDEAN*QLDSA 218
           WS+GQRQLVCLGRV+LKRS++LVLDEA   +D+A
Sbjct: 7   WSVGQRQLVCLGRVILKRSKILVLDEATASVDTA 40


>ref|XP_002457259.1| hypothetical protein SORBIDRAFT_03g004300 [Sorghum bicolor]
            gi|241929234|gb|EES02379.1| hypothetical protein
            SORBIDRAFT_03g004300 [Sorghum bicolor]
          Length = 1498

 Score =  107 bits (266), Expect(2) = 6e-32
 Identities = 54/70 (77%), Positives = 65/70 (92%)
 Frame = -1

Query: 237  TDNLIQQTLSQHFSNSTVITIAHRITSVLDSNMVLLLDHGLILEYDSPSKLLENKSSLFA 58
            TDNLIQ+TL Q FS +TVITIAHRITSVLDS+MVLLLD+G+ +E D+P+KLLE+KSSLF+
Sbjct: 1426 TDNLIQKTLRQQFSEATVITIAHRITSVLDSDMVLLLDNGVAVERDTPAKLLEDKSSLFS 1485

Query: 57   KLVAEYTVRS 28
            KLVAEYT+RS
Sbjct: 1486 KLVAEYTMRS 1495



 Score = 55.5 bits (132), Expect(2) = 6e-32
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -3

Query: 319  WSMGQRQLVCLGRVLLKRSQVLVLDEAN*QLDSA 218
            WS+GQRQLVCLGRV+LKRS++LVLDEA   +D+A
Sbjct: 1392 WSVGQRQLVCLGRVILKRSKILVLDEATASVDTA 1425


>ref|NP_001042159.1| Os01g0173900 [Oryza sativa Japonica Group]
            gi|113531690|dbj|BAF04073.1| Os01g0173900 [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  106 bits (264), Expect(2) = 1e-31
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = -1

Query: 237  TDNLIQQTLSQHFSNSTVITIAHRITSVLDSNMVLLLDHGLILEYDSPSKLLENKSSLFA 58
            TDNLIQ+TL Q FS++TVITIAHRITSVLDS+MVLLLD+G+ +E D+P++LLE+KSSLF+
Sbjct: 1433 TDNLIQKTLRQQFSDATVITIAHRITSVLDSDMVLLLDNGVAVERDTPTRLLEDKSSLFS 1492

Query: 57   KLVAEYTVRS 28
            KLVAEYT+RS
Sbjct: 1493 KLVAEYTMRS 1502



 Score = 55.5 bits (132), Expect(2) = 1e-31
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -3

Query: 319  WSMGQRQLVCLGRVLLKRSQVLVLDEAN*QLDSA 218
            WS+GQRQLVCLGRV+LKRS++LVLDEA   +D+A
Sbjct: 1399 WSVGQRQLVCLGRVILKRSKILVLDEATASVDTA 1432


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