BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027427
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    92   6e-17
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13

>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/77 (55%), Positives = 57/77 (74%)
 Frame = -3

Query: 233 VLVNGLCSKGRVDSAYTMVMGMLDKSNLKPLQPTYKHLIENLLGGRKLKEAMRLLRLMRK 54
           VL+N   S+ R+D AYT+ M M+DK+ L+P Q TYK LIE LL  RKL+EA+ LLRLM++
Sbjct: 480 VLINAFLSQKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQ 539

Query: 53  HQYPQLREPFIDYISKF 3
           H +P   EPF+ YIS+F
Sbjct: 540 HNHPPFPEPFVQYISRF 556


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/78 (53%), Positives = 57/78 (73%)
 Frame = -3

Query: 236 EVLVNGLCSKGRVDSAYTMVMGMLDKSNLKPLQPTYKHLIENLLGGRKLKEAMRLLRLMR 57
           EVL+NG  S+ R+D AY +++ M++ ++L P Q TYK +I  LLG RKL+EA+ LL LM+
Sbjct: 481 EVLINGFLSQKRIDGAYKLLVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLMK 540

Query: 56  KHQYPQLREPFIDYISKF 3
           K  YP   EPFI+YISKF
Sbjct: 541 KQNYPPFPEPFIEYISKF 558


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/78 (56%), Positives = 54/78 (69%)
 Frame = -3

Query: 236 EVLVNGLCSKGRVDSAYTMVMGMLDKSNLKPLQPTYKHLIENLLGGRKLKEAMRLLRLMR 57
           +VLV G  S+ ++D AYT ++ M++K  L P Q TYK LIE LL  RKL+EA  LLRLM+
Sbjct: 328 DVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMK 387

Query: 56  KHQYPQLREPFIDYISKF 3
           KH YP   EPF  YISKF
Sbjct: 388 KHNYPPFPEPFDQYISKF 405


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/78 (47%), Positives = 59/78 (75%)
 Frame = -3

Query: 236 EVLVNGLCSKGRVDSAYTMVMGMLDKSNLKPLQPTYKHLIENLLGGRKLKEAMRLLRLMR 57
           +VL++G  ++ +++ AY +++ + +K++++P Q TYK LI+NLL  RKL+EA+ LLRLM+
Sbjct: 474 DVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMK 533

Query: 56  KHQYPQLREPFIDYISKF 3
           K  YP   EPF+ YISKF
Sbjct: 534 KQNYPPFPEPFVQYISKF 551


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/78 (48%), Positives = 50/78 (64%)
 Frame = -3

Query: 236 EVLVNGLCSKGRVDSAYTMVMGMLDKSNLKPLQPTYKHLIENLLGGRKLKEAMRLLRLMR 57
           +VL +G  S+ R++ AY +V  +  K  + P Q TYK LIE LLG  K +EA+ LLRLM+
Sbjct: 480 DVLADGFLSQKRIEGAYELVAEISRKCRISPWQATYKKLIEKLLGVMKFEEALELLRLMK 539

Query: 56  KHQYPQLREPFIDYISKF 3
            H YP    PF+ YISKF
Sbjct: 540 SHNYPPYHLPFVPYISKF 557