BLASTX nr result

ID: Cimicifuga21_contig00027414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027414
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4...   231   7e-59
ref|XP_003589079.1| U-box domain-containing protein [Medicago tr...   231   1e-58
gb|AFK46109.1| unknown [Medicago truncatula]                          228   8e-58
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   225   5e-57
emb|CBI19404.3| unnamed protein product [Vitis vinifera]              224   1e-56

>ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 352

 Score =  231 bits (590), Expect = 7e-59
 Identities = 127/195 (65%), Positives = 146/195 (74%)
 Frame = -3

Query: 586 SLMETRIDGYDSSSTFSDCNSDRSGEFSTTPSPSRRCLIASASENPDDLIHQLVSNLHSS 407
           SL E RI+   SSS FSDCNSDRSGEF+T  S +RR LIA A+EN DDLI QLV++LHSS
Sbjct: 12  SLSELRINDDSSSSAFSDCNSDRSGEFATASSQTRRFLIACATENSDDLIRQLVADLHSS 71

Query: 406 SLDVXXXXXXXXXXXAKHKQENRLKIAQAGAVKPXXXXXXXXXXXXQEYGVTAILNLSLC 227
           S+D            AK+K ENR+KIA+AGA+KP            QEYGVTAILNLSLC
Sbjct: 72  SIDDQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSLC 131

Query: 226 DENKDLITKSGAIKPLVGALRTGTTTAKENSACALLRLSQIEVNKILIGRSGAIPLLVNL 47
           DENK++I  SGAIKPLV AL +GT TAKEN+ACALLRLSQ+E NK  IGRSGAIPLLV+L
Sbjct: 132 DENKEVIASSGAIKPLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVSL 191

Query: 46  LQTGSSRGKKDASTA 2
           L++G  R KKDASTA
Sbjct: 192 LESGGFRAKKDASTA 206


>ref|XP_003589079.1| U-box domain-containing protein [Medicago truncatula]
           gi|355478127|gb|AES59330.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 336

 Score =  231 bits (588), Expect = 1e-58
 Identities = 127/195 (65%), Positives = 144/195 (73%)
 Frame = -3

Query: 586 SLMETRIDGYDSSSTFSDCNSDRSGEFSTTPSPSRRCLIASASENPDDLIHQLVSNLHSS 407
           S  E  I+   +SS FSDCNSDRSGEF+TT S SRR  +A ASEN DDLI QLVS+LHS 
Sbjct: 4   SFNEFSINDDSTSSAFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSD 63

Query: 406 SLDVXXXXXXXXXXXAKHKQENRLKIAQAGAVKPXXXXXXXXXXXXQEYGVTAILNLSLC 227
           S++            AK+K ENR+KIA+AGA+KP            QEYGVTAILNLSLC
Sbjct: 64  SIEEQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLVTSQDLQLQEYGVTAILNLSLC 123

Query: 226 DENKDLITKSGAIKPLVGALRTGTTTAKENSACALLRLSQIEVNKILIGRSGAIPLLVNL 47
           DENK+LI  SGAIKPLV AL +GT+TAKEN+ACALLRLSQ+E NK  IGRSGAIPLLVNL
Sbjct: 124 DENKELIASSGAIKPLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNL 183

Query: 46  LQTGSSRGKKDASTA 2
           L +G  RGKKDASTA
Sbjct: 184 LGSGGIRGKKDASTA 198


>gb|AFK46109.1| unknown [Medicago truncatula]
          Length = 344

 Score =  228 bits (581), Expect = 8e-58
 Identities = 126/195 (64%), Positives = 143/195 (73%)
 Frame = -3

Query: 586 SLMETRIDGYDSSSTFSDCNSDRSGEFSTTPSPSRRCLIASASENPDDLIHQLVSNLHSS 407
           S  E  I+   +SS FSDCNSDRSGEF+TT S SRR  +A ASEN DDLI QLVS+LHS 
Sbjct: 12  SFNEFSINDDSTSSAFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSD 71

Query: 406 SLDVXXXXXXXXXXXAKHKQENRLKIAQAGAVKPXXXXXXXXXXXXQEYGVTAILNLSLC 227
           S++            AK+K ENR+KIA+A A+KP            QEYGVTAILNLSLC
Sbjct: 72  SIEEQKQAAMEIRLLAKNKPENRIKIAKADAIKPLISLVTSQDLQLQEYGVTAILNLSLC 131

Query: 226 DENKDLITKSGAIKPLVGALRTGTTTAKENSACALLRLSQIEVNKILIGRSGAIPLLVNL 47
           DENK+LI  SGAIKPLV AL +GT+TAKEN+ACALLRLSQ+E NK  IGRSGAIPLLVNL
Sbjct: 132 DENKELIASSGAIKPLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNL 191

Query: 46  LQTGSSRGKKDASTA 2
           L +G  RGKKDASTA
Sbjct: 192 LGSGGIRGKKDASTA 206


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 352

 Score =  225 bits (574), Expect = 5e-57
 Identities = 122/185 (65%), Positives = 138/185 (74%)
 Frame = -3

Query: 556 DSSSTFSDCNSDRSGEFSTTPSPSRRCLIASASENPDDLIHQLVSNLHSSSLDVXXXXXX 377
           D SS FSDCNSDRSGEF T  S SRR LIA A+EN DD I QLV +L S S+D       
Sbjct: 23  DDSSAFSDCNSDRSGEFPTASSESRRLLIACAAENSDDFIRQLVLDLESCSIDEQKQAAM 82

Query: 376 XXXXXAKHKQENRLKIAQAGAVKPXXXXXXXXXXXXQEYGVTAILNLSLCDENKDLITKS 197
                AK+K ENRLKI +AGA+KP            QEYGVTAILNLSLCDENK++I  S
Sbjct: 83  EIRLLAKNKPENRLKIVKAGALKPLISLISCSDSQLQEYGVTAILNLSLCDENKEVIASS 142

Query: 196 GAIKPLVGALRTGTTTAKENSACALLRLSQIEVNKILIGRSGAIPLLVNLLQTGSSRGKK 17
           GAIKPLV AL+TGT+TAKEN+ACALLRLSQ+E NK+ IGRSG+IPLLVNLL+TG  RGKK
Sbjct: 143 GAIKPLVRALKTGTSTAKENAACALLRLSQVEENKVAIGRSGSIPLLVNLLETGGFRGKK 202

Query: 16  DASTA 2
           DA+TA
Sbjct: 203 DAATA 207


>emb|CBI19404.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  224 bits (571), Expect = 1e-56
 Identities = 126/187 (67%), Positives = 140/187 (74%)
 Frame = -3

Query: 565 DGYDSSSTFSDCNSDRSGEFSTTPSPSRRCLIASASENPDDLIHQLVSNLHSSSLDVXXX 386
           D  D SSTFSDCNSDRSGEF TT S  RR L+A A++N DDLI QLVS+L+S S+D    
Sbjct: 56  DHNDYSSTFSDCNSDRSGEFPTTSSQGRRLLLACAADNCDDLIRQLVSDLNSCSIDEQKQ 115

Query: 385 XXXXXXXXAKHKQENRLKIAQAGAVKPXXXXXXXXXXXXQEYGVTAILNLSLCDENKDLI 206
                   AK+K ENRLKIA AGA+KP            QE GVTAILNLSLCDENK+LI
Sbjct: 116 AAMEIRLLAKNKPENRLKIAGAGAIKPLISLISSSDAQLQENGVTAILNLSLCDENKELI 175

Query: 205 TKSGAIKPLVGALRTGTTTAKENSACALLRLSQIEVNKILIGRSGAIPLLVNLLQTGSSR 26
             SGAIKPLV AL+TGT+TAKEN+ACALLRLSQIE NKI+IG +GAIPLLVNLL  GS R
Sbjct: 176 ASSGAIKPLVRALKTGTSTAKENAACALLRLSQIEENKIVIGMAGAIPLLVNLLGYGSFR 235

Query: 25  GKKDAST 5
           GKKDAST
Sbjct: 236 GKKDAST 242


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