BLASTX nr result

ID: Cimicifuga21_contig00027398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027398
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134370.1| PREDICTED: uncharacterized protein At1g28695...   249   4e-64
ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695...   248   1e-63
emb|CBI26472.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_003520411.1| PREDICTED: uncharacterized protein At1g28695...   246   3e-63
ref|XP_002511046.1| pentatricopeptide repeat-containing protein,...   245   7e-63

>ref|XP_004134370.1| PREDICTED: uncharacterized protein At1g28695-like [Cucumis sativus]
          Length = 305

 Score =  249 bits (636), Expect = 4e-64
 Identities = 118/198 (59%), Positives = 144/198 (72%)
 Frame = +2

Query: 5   MMWRRTSFLGDVLKRGYSFIFTDSDIMWLGNPFTRLSKDESVDIQISVDHFNGNPWSVAN 184
           MMW+RT FL +VLKRGYSFIFTD+D+MWL +PF +LSKDE+ D+QIS DHFNGNPWS +N
Sbjct: 119 MMWKRTLFLLEVLKRGYSFIFTDTDVMWLRDPFPKLSKDETEDLQISTDHFNGNPWSQSN 178

Query: 185 PINTGFYFVRSNNKTTSLFETWYDMRNVSNYKGMKEQDVLDKMMHKGIFRALGLKVRYLD 364
           PINTGFYFVRSNNKT +LF+ WY M+N  N  G KEQDVL  ++  GIFR L LKVR+L+
Sbjct: 179 PINTGFYFVRSNNKTIALFDKWYSMKN--NTAGQKEQDVLFNLIRAGIFRQLNLKVRFLN 236

Query: 365 TNFFSGFCENSRDFRAVATVHANCCRSINAKVADLIVVFRDWRKYTTSMNGLKNLSASGN 544
           T FFSGFC+ S DF  V+TVHANCCR+I AK++DL     DW+++  S N          
Sbjct: 237 TLFFSGFCQKSSDFHQVSTVHANCCRTIVAKISDLRATLGDWKRFRKSTNA--------- 287

Query: 545 ETTAVGWSRHVACVNSWK 598
            +    W+ HV C  SWK
Sbjct: 288 -SEIFWWTDHVGCKRSWK 304


>ref|XP_002270380.2| PREDICTED: uncharacterized protein At1g28695 [Vitis vinifera]
          Length = 341

 Score =  248 bits (632), Expect = 1e-63
 Identities = 118/197 (59%), Positives = 144/197 (73%)
 Frame = +2

Query: 5   MMWRRTSFLGDVLKRGYSFIFTDSDIMWLGNPFTRLSKDESVDIQISVDHFNGNPWSVAN 184
           MMWRRT FLG+VLK+GY+FIFTD DIMWL NPF RL+ ++SVD+QIS D FNG+ WS +N
Sbjct: 156 MMWRRTLFLGEVLKKGYNFIFTDIDIMWLRNPFPRLTLNQSVDLQISTDDFNGDEWSESN 215

Query: 185 PINTGFYFVRSNNKTTSLFETWYDMRNVSNYKGMKEQDVLDKMMHKGIFRALGLKVRYLD 364
            INTGFY ++SNNKT  LF  WY  RN SN  G+KEQDVLD M   G+FR LG+K R+LD
Sbjct: 216 HINTGFYMIKSNNKTIQLFGMWYAQRNNSN--GLKEQDVLDGMQKDGVFRDLGVKARFLD 273

Query: 365 TNFFSGFCENSRDFRAVATVHANCCRSINAKVADLIVVFRDWRKYTTSMNGLKNLSASGN 544
           + +FSGFC+ S+DF+ V TVHA CCRSI+AKVADL VV  DW ++  S           N
Sbjct: 274 SLYFSGFCKESKDFKVVTTVHATCCRSIHAKVADLTVVLHDWLRFKNSPT---------N 324

Query: 545 ETTAVGWSRHVACVNSW 595
           ET+   WS H AC++SW
Sbjct: 325 ETSTFQWSSHTACMHSW 341


>emb|CBI26472.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  248 bits (632), Expect = 1e-63
 Identities = 118/197 (59%), Positives = 144/197 (73%)
 Frame = +2

Query: 5   MMWRRTSFLGDVLKRGYSFIFTDSDIMWLGNPFTRLSKDESVDIQISVDHFNGNPWSVAN 184
           MMWRRT FLG+VLK+GY+FIFTD DIMWL NPF RL+ ++SVD+QIS D FNG+ WS +N
Sbjct: 87  MMWRRTLFLGEVLKKGYNFIFTDIDIMWLRNPFPRLTLNQSVDLQISTDDFNGDEWSESN 146

Query: 185 PINTGFYFVRSNNKTTSLFETWYDMRNVSNYKGMKEQDVLDKMMHKGIFRALGLKVRYLD 364
            INTGFY ++SNNKT  LF  WY  RN SN  G+KEQDVLD M   G+FR LG+K R+LD
Sbjct: 147 HINTGFYMIKSNNKTIQLFGMWYAQRNNSN--GLKEQDVLDGMQKDGVFRDLGVKARFLD 204

Query: 365 TNFFSGFCENSRDFRAVATVHANCCRSINAKVADLIVVFRDWRKYTTSMNGLKNLSASGN 544
           + +FSGFC+ S+DF+ V TVHA CCRSI+AKVADL VV  DW ++  S           N
Sbjct: 205 SLYFSGFCKESKDFKVVTTVHATCCRSIHAKVADLTVVLHDWLRFKNSPT---------N 255

Query: 545 ETTAVGWSRHVACVNSW 595
           ET+   WS H AC++SW
Sbjct: 256 ETSTFQWSSHTACMHSW 272


>ref|XP_003520411.1| PREDICTED: uncharacterized protein At1g28695-like [Glycine max]
          Length = 353

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/197 (60%), Positives = 145/197 (73%)
 Frame = +2

Query: 5   MMWRRTSFLGDVLKRGYSFIFTDSDIMWLGNPFTRLSKDESVDIQISVDHFNGNPWSVAN 184
           MMWRRT FL +VLKRGY+F+FTD+D+MWL NPF RLSK+E+ D QIS D + GNPWS  +
Sbjct: 160 MMWRRTQFLLEVLKRGYNFVFTDTDVMWLRNPFIRLSKNETEDFQISTDSYLGNPWSEKH 219

Query: 185 PINTGFYFVRSNNKTTSLFETWYDMRNVSNYKGMKEQDVLDKMMHKGIFRALGLKVRYLD 364
           PINTGFYFVRSNNKT SLFETWY  ++  N  G KEQDVL  ++  GI   LGL+VR+LD
Sbjct: 220 PINTGFYFVRSNNKTISLFETWYGQKD--NATGKKEQDVLLDLIRSGIVEHLGLRVRFLD 277

Query: 365 TNFFSGFCENSRDFRAVATVHANCCRSINAKVADLIVVFRDWRKYTTSMNGLKNLSASGN 544
           T +FSGFC++S+DFRAV T+HANCCRSI AKVAD+ V  RDW+K+       K L A  N
Sbjct: 278 TLYFSGFCQDSKDFRAVVTIHANCCRSITAKVADMKVALRDWKKF-------KKLEA--N 328

Query: 545 ETTAVGWSRHVACVNSW 595
            T    W++H  C  SW
Sbjct: 329 STVNPQWTKHNWCWQSW 345


>ref|XP_002511046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550161|gb|EEF51648.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 360

 Score =  245 bits (625), Expect = 7e-63
 Identities = 120/198 (60%), Positives = 146/198 (73%)
 Frame = +2

Query: 5   MMWRRTSFLGDVLKRGYSFIFTDSDIMWLGNPFTRLSKDESVDIQISVDHFNGNPWSVAN 184
           MMWRRT  LGD+LKRGY+FIFTD+D+MWL NPF +L  D SVD QIS D FN + WS AN
Sbjct: 173 MMWRRTLLLGDILKRGYNFIFTDTDVMWLRNPFPKLVLDGSVDFQISTDKFNRDEWSEAN 232

Query: 185 PINTGFYFVRSNNKTTSLFETWYDMRNVSNYKGMKEQDVLDKMMHKGIFRALGLKVRYLD 364
           PINTGFY +RSNNKT  LF++WY  ++ S   G KEQDVLD MM +G+FR LGL+VR+LD
Sbjct: 233 PINTGFYMIRSNNKTIELFDSWYARKDRS--VGQKEQDVLDSMMRQGVFRNLGLRVRFLD 290

Query: 365 TNFFSGFCENSRDFRAVATVHANCCRSINAKVADLIVVFRDWRKYTTSMNGLKNLSASGN 544
           T +FSGFC++S D RAV TVHANCCR+I+AK+ADL  V R W+ +       KN S   N
Sbjct: 291 TLYFSGFCQDSGDIRAVTTVHANCCRTISAKIADLTAVLRQWKSF-------KN-SPPAN 342

Query: 545 ETTAVGWSRHVACVNSWK 598
           ETT    + HVAC +SW+
Sbjct: 343 ETTYGMLNNHVACRDSWR 360


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