BLASTX nr result

ID: Cimicifuga21_contig00027397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027397
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vin...   224   4e-57
emb|CAN69449.1| hypothetical protein VITISV_040941 [Vitis vinifera]   224   4e-57
emb|CAD35400.1| shaker-like potassium channel [Vitis vinifera]        224   4e-57
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55

>ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|222843391|gb|EEE80938.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/135 (79%), Positives = 117/135 (86%)
 Frame = -2

Query: 406 RWYHIWTQFILLWAVYSSFFTPIEFGFFRGLPKDLLFLDIAGQVAFLCDIVIQFFLAYRD 227
           RWY  WT+FILLWAVYSSFFTP+EFGFFRGLP++L  LDI GQVAFL DI++QFF+AYRD
Sbjct: 89  RWYRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQVAFLLDIILQFFIAYRD 148

Query: 226 SQTYLMVTKRTSIALRYLKSSFIIDVLACLPWDAIYRASGRREEVRYLLWIRLCRVRKGI 47
           SQTY  V KRT IALRYLKS FIID+LACLPWD IY+A G REEVRYLLWIRL RVRK  
Sbjct: 149 SQTYRTVYKRTPIALRYLKSHFIIDLLACLPWDIIYKACGHREEVRYLLWIRLSRVRKVT 208

Query: 46  EFFQTMEKDIRINYL 2
           +FFQ MEKDIRINYL
Sbjct: 209 DFFQKMEKDIRINYL 223


>ref|XP_002262949.1| PREDICTED: potassium channel SKOR [Vitis vinifera]
           gi|296087079|emb|CBI33453.3| unnamed protein product
           [Vitis vinifera]
          Length = 794

 Score =  224 bits (572), Expect = 4e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 406 RWYHIWTQFILLWAVYSSFFTPIEFGFFRGLPKDLLFLDIAGQVAFLCDIVIQFFLAYRD 227
           RWY  WT+FILLWAVYSSFFTP+EFGFFRGLP+DL+FLDIAGQ+AFL DIV++FFLAYRD
Sbjct: 43  RWYRTWTKFILLWAVYSSFFTPMEFGFFRGLPEDLVFLDIAGQIAFLIDIVLRFFLAYRD 102

Query: 226 SQTYLMVTKRTSIALRYLKSSFIIDVLACLPWDAIYRASGRREEVRYLLWIRLCRVRKGI 47
           + TY MV KRTSIALRY+KSSF+ID++ CLPWD IY+A GR+EEVRYLLWIRL RV K  
Sbjct: 103 AHTYRMVYKRTSIALRYMKSSFVIDLICCLPWDIIYKACGRKEEVRYLLWIRLIRVCKVT 162

Query: 46  EFFQTMEKDIRINYL 2
           +FFQ +EKD RINY+
Sbjct: 163 DFFQNLEKDTRINYM 177


>emb|CAN69449.1| hypothetical protein VITISV_040941 [Vitis vinifera]
          Length = 259

 Score =  224 bits (572), Expect = 4e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 406 RWYHIWTQFILLWAVYSSFFTPIEFGFFRGLPKDLLFLDIAGQVAFLCDIVIQFFLAYRD 227
           RWY  WT+FILLWAVYSSFFTP+EFGFFRGLP+DL+FLDIAGQ+AFL DIV++FFLAYRD
Sbjct: 42  RWYRTWTKFILLWAVYSSFFTPMEFGFFRGLPEDLVFLDIAGQIAFLIDIVLRFFLAYRD 101

Query: 226 SQTYLMVTKRTSIALRYLKSSFIIDVLACLPWDAIYRASGRREEVRYLLWIRLCRVRKGI 47
           + TY MV KRTSIALRY+KSSF+ID++ CLPWD IY+A GR+EEVRYLLWIRL RV K  
Sbjct: 102 AHTYRMVYKRTSIALRYMKSSFVIDLICCLPWDIIYKACGRKEEVRYLLWIRLIRVCKVT 161

Query: 46  EFFQTMEKDIRINYL 2
           +FFQ +EKD RINY+
Sbjct: 162 DFFQNLEKDTRINYM 176


>emb|CAD35400.1| shaker-like potassium channel [Vitis vinifera]
          Length = 795

 Score =  224 bits (572), Expect = 4e-57
 Identities = 103/135 (76%), Positives = 120/135 (88%)
 Frame = -2

Query: 406 RWYHIWTQFILLWAVYSSFFTPIEFGFFRGLPKDLLFLDIAGQVAFLCDIVIQFFLAYRD 227
           RWY  WT+FILLWAVYSSFFTP+EFGFFRGLP+DL+FLDIAGQ+AFL DIV++FFLAYRD
Sbjct: 43  RWYRTWTKFILLWAVYSSFFTPMEFGFFRGLPEDLVFLDIAGQIAFLIDIVLRFFLAYRD 102

Query: 226 SQTYLMVTKRTSIALRYLKSSFIIDVLACLPWDAIYRASGRREEVRYLLWIRLCRVRKGI 47
           + TY MV KRTSIALRY+KSSF+ID++ CLPWD IY+A GR+EEVRYLLWIRL RV K  
Sbjct: 103 AHTYRMVYKRTSIALRYMKSSFVIDLICCLPWDIIYKACGRKEEVRYLLWIRLIRVCKVT 162

Query: 46  EFFQTMEKDIRINYL 2
           +FFQ +EKD RINY+
Sbjct: 163 DFFQNLEKDTRINYM 177


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/135 (76%), Positives = 115/135 (85%)
 Frame = -2

Query: 406 RWYHIWTQFILLWAVYSSFFTPIEFGFFRGLPKDLLFLDIAGQVAFLCDIVIQFFLAYRD 227
           RWY  WT FILLWAVYSSFFTP+EFGFFRGLP++L  +DI GQVAFL DIV+QFF+AYRD
Sbjct: 77  RWYRAWTIFILLWAVYSSFFTPMEFGFFRGLPENLFIMDIVGQVAFLLDIVLQFFVAYRD 136

Query: 226 SQTYLMVTKRTSIALRYLKSSFIIDVLACLPWDAIYRASGRREEVRYLLWIRLCRVRKGI 47
           SQTY M+ KR+ IALRYLKS FIID+L CLPWD I++  GRREEVRYLLWIRL RVRK  
Sbjct: 137 SQTYRMIYKRSPIALRYLKSHFIIDLLGCLPWDIIFKVCGRREEVRYLLWIRLSRVRKVT 196

Query: 46  EFFQTMEKDIRINYL 2
            FFQ +EKDIRINYL
Sbjct: 197 SFFQKLEKDIRINYL 211


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