BLASTX nr result

ID: Cimicifuga21_contig00027381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027381
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR96008.1| ARIADNE-like protein [Musa acuminata]                   72   5e-11
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...    69   4e-10
emb|CBI38350.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_004167703.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   1e-09

>gb|AAR96008.1| ARIADNE-like protein [Musa acuminata]
          Length = 492

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 15/88 (17%)
 Frame = -1

Query: 263 YGGNE--ESDDTTSLCQ*DYTILREGDI*QRQDENSAR-------------ILLLYYNWS 129
           +G NE  +SDD TS  Q +YTIL E DI Q Q+E+ +R             ILL +YNWS
Sbjct: 38  FGDNESDDSDDITSRQQQNYTILSEADIRQHQEEDISRVSTVLSIPRYAACILLRHYNWS 97

Query: 128 VTDVHEAWSTDEEKVRATAGLLKKPAAL 45
           ++ VH+ W  DEE+VR   GLL+KP  +
Sbjct: 98  ISRVHDEWFADEERVRKVVGLLEKPVEM 125


>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 14/81 (17%)
 Frame = -1

Query: 254 NEESDDTTS-LCQ*DYTILREGDI*QRQDEN-------------SARILLLYYNWSVTDV 117
           +++SDD  S   Q +YTIL EGDI QRQD++             +A ILL YYNWSV+ V
Sbjct: 47  SDDSDDLISHRYQQNYTILSEGDIRQRQDDDIMRIATVLSISKVAATILLRYYNWSVSKV 106

Query: 116 HEAWSTDEEKVRATAGLLKKP 54
           H+ W  DEEKVR   GLL++P
Sbjct: 107 HDEWFADEEKVRRAVGLLEEP 127


>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 14/88 (15%)
 Frame = -1

Query: 254 NEESDDTTS-LCQ*DYTILREGDI*QRQDEN-------------SARILLLYYNWSVTDV 117
           +++SDD TS   Q +YTIL E DI QRQ+++             SA ILL +Y WSV+ V
Sbjct: 108 SDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKV 167

Query: 116 HEAWSTDEEKVRATAGLLKKPAALHYPN 33
           H+ W  DEEKVR   GLL+KP  + +PN
Sbjct: 168 HDEWFADEEKVRKAVGLLEKP-VVQFPN 194


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 14/88 (15%)
 Frame = -1

Query: 254 NEESDDTTS-LCQ*DYTILREGDI*QRQDEN-------------SARILLLYYNWSVTDV 117
           +++SDD TS   Q +YTIL E DI QRQ+++             SA ILL +Y WSV+ V
Sbjct: 37  SDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKV 96

Query: 116 HEAWSTDEEKVRATAGLLKKPAALHYPN 33
           H+ W  DEEKVR   GLL+KP  + +PN
Sbjct: 97  HDEWFADEEKVRKAVGLLEKP-VVQFPN 123


>ref|XP_004167703.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Cucumis
           sativus]
          Length = 327

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
 Frame = -1

Query: 254 NEESDDTTSLC-Q*DYTILREGDI*QRQDEN-------------SARILLLYYNWSVTDV 117
           +++SDD  S   Q +Y IL E DI Q Q+E+             +A ILL YYNWSV+ V
Sbjct: 54  SDDSDDMVSYRHQQNYIILAEADIQQCQEEDITRVSTVLSISKVAASILLRYYNWSVSKV 113

Query: 116 HEAWSTDEEKVRATAGLLKKPAALHYPNLPI 24
           H+ W  DEEKVR + GLL+KP   H   L +
Sbjct: 114 HDEWFADEEKVRRSVGLLQKPVLRHSNELEL 144


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