BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027361
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                 73   2e-11
emb|CAD39399.2| OSJNBb0089K24.9 [Oryza sativa Japonica Group]          73   2e-11
gb|AAM74295.1|AC083944_13 Putative retroelement [Oryza sativa Ja...    72   4e-11
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...    72   6e-11
emb|CAH65890.1| OSIGBa0096I22.3 [Oryza sativa Indica Group]            72   6e-11

>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2    KCLRKPDIVAQPSDLEITEDVTFKVESVKILARDVKKLRNRVVPLVKVQWSG-DESNVTW 178
            KCLR P   A PS +E+ ED+T+  + V+IL    +K RNRV+   KVQWS   E   TW
Sbjct: 1396 KCLRVPTEEADPSRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQWSNHSEEEATW 1455

Query: 179  AREEDVRRRHS*LFQ*SL*SRGRD 250
             RE++++  H  LF  S  SRGRD
Sbjct: 1456 EREDELKSAHPHLFSSSSESRGRD 1479


>emb|CAD39399.2| OSJNBb0089K24.9 [Oryza sativa Japonica Group]
          Length = 1320

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2    KCLRKPDIVAQPSDLEITEDVTFKVESVKILARDVKKLRNRVVPLVKVQWSG-DESNVTW 178
            KCLR P   A P  +EI ED+T+  ++++IL  D ++ RNRV+   KVQWS   E   TW
Sbjct: 1235 KCLRVPTKEANPEQIEIQEDLTYIEKTIRILETDERRTRNRVIRFCKVQWSNHSEEEATW 1294

Query: 179  AREEDVRRRHS*LFQ*SL*SRGRD 250
             +E++++  H  LF  S  SRGRD
Sbjct: 1295 EQEDELKSAHPHLFASSSESRGRD 1318


>gb|AAM74295.1|AC083944_13 Putative retroelement [Oryza sativa Japonica Group]
           gi|31430528|gb|AAP52430.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 518

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   KCLRKPDIVAQPSDLEITEDVTFKVESVKILARDVKKLRNRVVPLVKVQWSG-DESNVTW 178
           KCLR P   A P  +E+ ED+T+  + V+IL    +K RNRV+   KVQWS   E   TW
Sbjct: 433 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEESERKTRNRVIRFCKVQWSNHSEEEATW 492

Query: 179 AREEDVRRRHS*LFQ*SL*SRGRD 250
            RE++++  H  LF  S  SRGRD
Sbjct: 493 EREDELKSAHPHLFASSSESRGRD 516


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2    KCLRKPDIVAQPSDLEITEDVTFKVESVKILARDVKKLRNRVVPLVKVQWSG-DESNVTW 178
            KCLR P   A P  +E+ ED+T+  + V+IL    +K RNRV+   KVQWS   E   TW
Sbjct: 1642 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQWSNHSEEEATW 1701

Query: 179  AREEDVRRRHS*LFQ*SL*SRGRD 250
             RE++++  H  LF  S  SRGRD
Sbjct: 1702 EREDELKSAHPHLFSSSSESRGRD 1725


>emb|CAH65890.1| OSIGBa0096I22.3 [Oryza sativa Indica Group]
          Length = 430

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   KCLRKPDIVAQPSDLEITEDVTFKVESVKILARDVKKLRNRVVPLVKVQWSG-DESNVTW 178
           KCLR P   A P  +E+ ED+T+  + V+IL    +K RNRV+   KVQWS   E   TW
Sbjct: 345 KCLRVPTEEADPDRIELQEDLTYVEKPVRILEVSERKTRNRVIRFCKVQWSNHSEEEATW 404

Query: 179 AREEDVRRRHS*LFQ*SL*SRGRD 250
            RE++++  H  LF  S  SRGRD
Sbjct: 405 EREDELKSAHPYLFSSSSESRGRD 428