BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027357
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thalia...   111   5e-23
ref|XP_002891184.1| basic helix-loop-helix family protein [Arabi...   107   1e-21
ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like ...   103   1e-20
ref|XP_002327358.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002521827.1| DNA binding protein, putative [Ricinus commu...    97   1e-18

>ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
           gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName:
           Full=Transcription factor bHLH80; AltName: Full=Basic
           helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
           80; AltName: Full=Transcription factor EN 71; AltName:
           Full=bHLH transcription factor bHLH080
           gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix
           protein 1A, putative; 28707-26892 [Arabidopsis thaliana]
           gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2
           [Arabidopsis thaliana]
           gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH
           transcription factor [Arabidopsis thaliana]
           gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2
           [Arabidopsis thaliana] gi|332193674|gb|AEE31795.1|
           transcription factor bHLH80 [Arabidopsis thaliana]
          Length = 259

 Score =  111 bits (278), Expect = 5e-23
 Identities = 66/130 (50%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
 Frame = +2

Query: 95  HTASLFTRQNSSPPQLLANLLTSPSHHGDGDGVASNYDILSF-LDIPPTTRESDPTQQF- 268
           H    F RQNSSP   L+   +    +    G+ +NYD LS  +DI PT R  D   QF 
Sbjct: 90  HQGGGFHRQNSSPADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDISPTKRSRDMETQFS 149

Query: 269 -QLKGEQSSS----FSDMEMEKLFQDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXK 433
            QLK EQ S       DM M+K+F+DSVPCRVRAKRGCATHPRSIAE            +
Sbjct: 150 SQLKEEQMSGGISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRR 209

Query: 434 LQELVPNMDK 463
           LQELVPNMDK
Sbjct: 210 LQELVPNMDK 219


>ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337026|gb|EFH67443.1| basic
           helix-loop-helix family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 256

 Score =  107 bits (266), Expect = 1e-21
 Identities = 65/130 (50%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
 Frame = +2

Query: 95  HTASLFTRQNSSPPQLLANLLTSPSHHGDGDGVASNYDILSF-LDIPPTTRESDPTQQF- 268
           H    F RQNSSP   L+        +    G+ +NYD LS  +DI PT R  D   QF 
Sbjct: 87  HQGGGFHRQNSSPADFLSGSGVGTDGYFSSFGIPANYDYLSTNVDISPTKRSRDMETQFS 146

Query: 269 -QLKGEQSSS----FSDMEMEKLFQDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXK 433
            QLK EQ S       DM M+KL + SVPCRVRAKRGCATHPRSIAE            +
Sbjct: 147 SQLKEEQMSGGVSGMMDMNMDKLIEGSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRR 206

Query: 434 LQELVPNMDK 463
           LQELVPNMDK
Sbjct: 207 LQELVPNMDK 216


>ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
           gi|449522500|ref|XP_004168264.1| PREDICTED:
           transcription factor bHLH80-like [Cucumis sativus]
          Length = 244

 Score =  103 bits (257), Expect = 1e-20
 Identities = 70/130 (53%), Positives = 79/130 (60%), Gaps = 12/130 (9%)
 Frame = +2

Query: 110 FTRQNSSPPQLLANLLTSPSHHGDGDGVASNYDILSF--LDIPPTTRESDPT--QQF--- 268
           F RQNSSPP+ LA     PS  G  +G  ++Y + S   LDI PT++ S     Q F   
Sbjct: 84  FHRQNSSPPEFLA-----PS--GIAEGFYTSYPLNSSPTLDISPTSKPSTDVDAQNFFPK 136

Query: 269 ---QLKGEQS--SSFSDMEMEKLFQDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXK 433
              QLK E S  SS  DMEMEKL +DSVPCRVRAKRGCATHPRSIAE            K
Sbjct: 137 FSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRK 196

Query: 434 LQELVPNMDK 463
           LQE+VPNMDK
Sbjct: 197 LQEVVPNMDK 206


>ref|XP_002327358.1| predicted protein [Populus trichocarpa] gi|222835728|gb|EEE74163.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 17/150 (11%)
 Frame = +2

Query: 65  NSTSVYGDPT--HTASLFTRQNSSPPQLLANL-LTSPSHHGDGDGVASNYDILS-FLDIP 232
           N++S   +P    T S F RQNSSP   L N  + S   +    G+ASNY+ +   +++ 
Sbjct: 77  NASSAAVEPGLYETGSGFQRQNSSPADFLGNSGIGSDQGYFSNYGIASNYEYMPPNMEVS 136

Query: 233 PTTRES------DPTQQFQ--LKGEQS-----SSFSDMEMEKLFQDSVPCRVRAKRGCAT 373
           P+ + +      +P  ++   LKG Q+     SS  +MEM+KL ++SVPC++RAKRGCAT
Sbjct: 137 PSAKRARELELQNPPARYPPPLKGAQTGSLRASSLIEMEMDKLLEESVPCKIRAKRGCAT 196

Query: 374 HPRSIAEXXXXXXXXXXXXKLQELVPNMDK 463
           HPRSIAE            KLQELVPNMDK
Sbjct: 197 HPRSIAERVRRTRISDRIRKLQELVPNMDK 226


>ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
           gi|223539040|gb|EEF40637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 284

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 62/138 (44%), Positives = 74/138 (53%), Gaps = 20/138 (14%)
 Frame = +2

Query: 110 FTRQNSSPPQLLANLLTSPSHHGDGDGVASNYDILS-FLDIPPTTRESDPTQQFQ----- 271
           F RQ+SSP   L N       +    G+  NY+ +S  +D+ P+ + +   Q        
Sbjct: 93  FQRQHSSPADFLVNSGIGNDGYFANFGIPPNYEYISPNMDVSPSGKRTRDVQLQHSSANK 152

Query: 272 ----LKGEQSS----------SFSDMEMEKLFQDSVPCRVRAKRGCATHPRSIAEXXXXX 409
               LKGEQSS          S  +MEMEKL +DSVPCRVRAKRGCATHPRSIAE     
Sbjct: 153 YPPLLKGEQSSQVPGGGDGMSSLIEMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRT 212

Query: 410 XXXXXXXKLQELVPNMDK 463
                  KLQELVPNMDK
Sbjct: 213 RISDRIRKLQELVPNMDK 230