BLASTX nr result

ID: Cimicifuga21_contig00027356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027356
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH91863.1| PIN-FORMED1 [Cardamine hirsuta]                         94   1e-17
gb|AAD04376.1| putative auxin efflux carrier protein [Arabidopsi...    93   2e-17
gb|AEK01107.1| auxin transport protein [Capsella bursa-pastoris]       93   2e-17
ref|XP_002887490.1| pin-formed 1 [Arabidopsis lyrata subsp. lyra...    93   2e-17
ref|NP_177500.1| auxin efflux carrier component 1 [Arabidopsis t...    93   2e-17

>gb|ACH91863.1| PIN-FORMED1 [Cardamine hirsuta]
          Length = 623

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITILYYIVLGL 143
           AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPIT+LYYI+LGL
Sbjct: 576 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYIILGL 622


>gb|AAD04376.1| putative auxin efflux carrier protein [Arabidopsis thaliana]
          Length = 622

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITILYYIVLGL 143
           AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPIT+LYYI+LGL
Sbjct: 576 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622


>gb|AEK01107.1| auxin transport protein [Capsella bursa-pastoris]
          Length = 622

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITILYYIVLGL 143
           AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPIT+LYYI+LGL
Sbjct: 576 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622


>ref|XP_002887490.1| pin-formed 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297333331|gb|EFH63749.1| pin-formed 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 622

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITILYYIVLGL 143
           AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPIT+LYYI+LGL
Sbjct: 576 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622


>ref|NP_177500.1| auxin efflux carrier component 1 [Arabidopsis thaliana]
           gi|42558879|sp|Q9C6B8.1|PINI_ARATH RecName: Full=Auxin
           efflux carrier component 1; AltName: Full=Protein
           PIN-FORMED; Short=AtPIN1
           gi|12323693|gb|AAG51807.1|AC079676_2 auxin transporter
           splice variant b, putative; 17621-14517 [Arabidopsis
           thaliana] gi|13937193|gb|AAK50090.1|AF372950_1
           At1g73590/F6D5_2 [Arabidopsis thaliana]
           gi|20334720|gb|AAM16221.1| At1g73590/F6D5_2 [Arabidopsis
           thaliana] gi|332197358|gb|AEE35479.1| auxin efflux
           carrier component 1 [Arabidopsis thaliana]
          Length = 622

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +3

Query: 3   AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITILYYIVLGL 143
           AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPIT+LYYI+LGL
Sbjct: 576 AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLGL 622


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