BLASTX nr result

ID: Cimicifuga21_contig00027351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027351
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplas...   632   e-179
ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|2...   613   e-173
gb|AFP19450.1| choline monooxygenase [Camellia sinensis]              610   e-172
ref|XP_003549280.1| PREDICTED: choline monooxygenase, chloroplas...   599   e-169
ref|XP_002518256.1| choline monooxygenase, putative [Ricinus com...   590   e-166

>ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplastic [Vitis vinifera]
            gi|297735449|emb|CBI17889.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  632 bits (1629), Expect = e-179
 Identities = 284/362 (78%), Positives = 327/362 (90%)
 Frame = +1

Query: 7    FDPKIPLEKAQTPPSSWYTDPSFHDLELHRVFYRGWQAVGYTEQMKNPHDFFTGRLGSVQ 186
            F+P+IP+E+A TPPSSWYTDPSF  LEL RVFYRGWQAVGYTEQ+KNP DFFTGRLG+V+
Sbjct: 80   FNPRIPVEQALTPPSSWYTDPSFLALELDRVFYRGWQAVGYTEQIKNPRDFFTGRLGNVE 139

Query: 187  FVICRDANGKIHAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRISEIQ 366
            FV+CRD NGK+HAFHNVCRHHASLLA GSG+KSCFVCPYH WTYGLDG LLKATRI+ I+
Sbjct: 140  FVVCRDNNGKLHAFHNVCRHHASLLAYGSGQKSCFVCPYHAWTYGLDGALLKATRITGIK 199

Query: 367  NFNVNDFGLIPLQVAIWGPFILINVDNDIQPQQEARCKVVASDWLGSCSEILSTNGIDSS 546
            +F++N+FGLIPL++A WGPF+L+N++ND+ PQ EA  K+V  +WLGS S+ILS  GID+S
Sbjct: 200  DFSINEFGLIPLRIATWGPFVLLNINNDVSPQHEADSKIVGKEWLGSSSDILSNGGIDTS 259

Query: 547  LSFVCRREYTINCNWKVFCDNYLDGGYHVPYAHTGLASGLKLESYSTTTFEKVSIQICEG 726
            LS+VCRREYTI CNWKVFCDNYLDGGYHVPYAH GLASGLKLESYSTTTFE+VSIQ CEG
Sbjct: 260  LSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLESYSTTTFERVSIQSCEG 319

Query: 727  GSIDDEHDYDRLGSKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVIFDYFLIPSLK 906
            G  + E D+DRLG+KA+YAFIYPNFMINRYGPWMDTNLVLPLGP  C+V+FDYFL  SLK
Sbjct: 320  GPGESEDDFDRLGTKALYAFIYPNFMINRYGPWMDTNLVLPLGPRTCKVVFDYFLEASLK 379

Query: 907  DDRAFIEKSLEESEKVQIEDIALCEGVQKGLESPTYCTGRYAPTVEKAMHHFHCLLYENL 1086
            DD+AFIE+SLE+SE+VQ+EDI LCEGVQ+GLESP YC+GRYAPTVE AMHHFHCLL+ENL
Sbjct: 380  DDKAFIERSLEDSERVQMEDIILCEGVQRGLESPAYCSGRYAPTVEMAMHHFHCLLHENL 439

Query: 1087 AK 1092
             K
Sbjct: 440  TK 441


>ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|222854076|gb|EEE91623.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  613 bits (1582), Expect = e-173
 Identities = 279/359 (77%), Positives = 317/359 (88%)
 Frame = +1

Query: 1    EDFDPKIPLEKAQTPPSSWYTDPSFHDLELHRVFYRGWQAVGYTEQMKNPHDFFTGRLGS 180
            ++FDP IP+EKA TPPSSWYTDPSF D ELHRVFY+GWQAVGYTEQ+KNP DFFTGRLG+
Sbjct: 47   DEFDPNIPIEKALTPPSSWYTDPSFFDFELHRVFYKGWQAVGYTEQIKNPRDFFTGRLGN 106

Query: 181  VQFVICRDANGKIHAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRISE 360
            V+F++CRD +GKIHAFHNVCRHHASL+ASG+G+KSCFVCPYHGWTYGLDG LLKATRI+ 
Sbjct: 107  VEFLVCRDDDGKIHAFHNVCRHHASLVASGNGQKSCFVCPYHGWTYGLDGALLKATRITG 166

Query: 361  IQNFNVNDFGLIPLQVAIWGPFILINVDNDIQPQQEARCKVVASDWLGSCSEILSTNGID 540
            IQNF+VN+FGL PL VA WGPF+L+N+D +I PQQEA    V S+WLGSCSE L+ NG+D
Sbjct: 167  IQNFDVNEFGLKPLNVATWGPFVLLNLDKEILPQQEAD-NTVGSEWLGSCSEYLAANGVD 225

Query: 541  SSLSFVCRREYTINCNWKVFCDNYLDGGYHVPYAHTGLASGLKLESYSTTTFEKVSIQIC 720
            SSLS++CRR Y I CNWKVFCDNYLDGGYHVPYAH GLASGLKL SYST T+EKVSIQ C
Sbjct: 226  SSLSYLCRRVYDIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLNSYSTKTYEKVSIQSC 285

Query: 721  EGGSIDDEHDYDRLGSKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVIFDYFLIPS 900
            +GGS + E D DRLGSKA+YAFIYPNFMINRYGPWMDTNLVLPLGP KCQVIFDYF+   
Sbjct: 286  DGGSTESEDDIDRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYFIEAH 345

Query: 901  LKDDRAFIEKSLEESEKVQIEDIALCEGVQKGLESPTYCTGRYAPTVEKAMHHFHCLLY 1077
            LKDD+ FIE+SL +SE+VQIEDI LCEGVQ+GLE+P YC+GRYAP VE AMHHFH LL+
Sbjct: 346  LKDDKDFIERSLVDSERVQIEDIVLCEGVQRGLETPAYCSGRYAPMVEHAMHHFHQLLH 404


>gb|AFP19450.1| choline monooxygenase [Camellia sinensis]
          Length = 434

 Score =  610 bits (1572), Expect = e-172
 Identities = 281/360 (78%), Positives = 318/360 (88%)
 Frame = +1

Query: 7    FDPKIPLEKAQTPPSSWYTDPSFHDLELHRVFYRGWQAVGYTEQMKNPHDFFTGRLGSVQ 186
            FDPKIPLE+A TPPSSWYT PSF  LE  RVF+RGWQAVG TEQ+K   +FFTGRLG+V+
Sbjct: 74   FDPKIPLEEALTPPSSWYTQPSFLSLEFDRVFFRGWQAVGCTEQIKESGNFFTGRLGNVE 133

Query: 187  FVICRDANGKIHAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRISEIQ 366
            +V+CRD NG +HAFHNVCRHHASLLASGSG  SCFVCPYHGWTY LDG LLKATRI+ I+
Sbjct: 134  YVVCRDDNGNVHAFHNVCRHHASLLASGSGLLSCFVCPYHGWTYXLDGALLKATRITGIR 193

Query: 367  NFNVNDFGLIPLQVAIWGPFILINVDNDIQPQQEARCKVVASDWLGSCSEILSTNGIDSS 546
            NFNVN+FGLIPL+VAIWGPF+L+N++ DI PQQ A    +  +WLGS SEILSTNG+DSS
Sbjct: 194  NFNVNEFGLIPLKVAIWGPFVLLNLE-DIPPQQAADVNNIGKEWLGSSSEILSTNGVDSS 252

Query: 547  LSFVCRREYTINCNWKVFCDNYLDGGYHVPYAHTGLASGLKLESYSTTTFEKVSIQICEG 726
            LS++CRREYTI CNWKVFCDNYLDGGYHVPYAH GL+SGL LESYSTTTFEKVSIQ C+G
Sbjct: 253  LSYICRREYTIECNWKVFCDNYLDGGYHVPYAHKGLSSGLNLESYSTTTFEKVSIQQCDG 312

Query: 727  GSIDDEHDYDRLGSKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVIFDYFLIPSLK 906
            GS + E++Y+RLGSKA+YAFIYPNFMINRYGPWMDTNLVLP+G  KCQVIFDYFL  SLK
Sbjct: 313  GSAETENEYERLGSKALYAFIYPNFMINRYGPWMDTNLVLPIGSRKCQVIFDYFLDTSLK 372

Query: 907  DDRAFIEKSLEESEKVQIEDIALCEGVQKGLESPTYCTGRYAPTVEKAMHHFHCLLYENL 1086
            +D AFIE SLE+SE+VQ+EDI LCEGVQ+GLESP YC+GRYAP+VEKAMHHFHCLLY NL
Sbjct: 373  EDIAFIESSLEDSERVQMEDIILCEGVQRGLESPAYCSGRYAPSVEKAMHHFHCLLYHNL 432


>ref|XP_003549280.1| PREDICTED: choline monooxygenase, chloroplastic-like [Glycine max]
          Length = 418

 Score =  599 bits (1545), Expect = e-169
 Identities = 274/362 (75%), Positives = 316/362 (87%)
 Frame = +1

Query: 7    FDPKIPLEKAQTPPSSWYTDPSFHDLELHRVFYRGWQAVGYTEQMKNPHDFFTGRLGSVQ 186
            F+PK P+E+A TPP+SWYT PSF  LEL RVFYRGWQ VG TEQ+K+P D+FTGRLG V+
Sbjct: 57   FNPKTPIEEAVTPPTSWYTHPSFFHLELDRVFYRGWQVVGSTEQIKDPRDYFTGRLGDVE 116

Query: 187  FVICRDANGKIHAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRISEIQ 366
            +V+CRD +G + AFHNVCRHHASLLA GSGKKSCFVCPYHGWTYG +G LLKATRIS ++
Sbjct: 117  YVVCRDDSGIVRAFHNVCRHHASLLAYGSGKKSCFVCPYHGWTYGFNGALLKATRISGMR 176

Query: 367  NFNVNDFGLIPLQVAIWGPFILINVDNDIQPQQEARCKVVASDWLGSCSEILSTNGIDSS 546
            NFNVNDFGL+P++VA WGPF+L+N++ +   ++E     V+ +WLGS SEILSTNG+DSS
Sbjct: 177  NFNVNDFGLLPMKVATWGPFVLLNLEKENLSKKEVDSHNVSKEWLGSSSEILSTNGVDSS 236

Query: 547  LSFVCRREYTINCNWKVFCDNYLDGGYHVPYAHTGLASGLKLESYSTTTFEKVSIQICEG 726
            LS+VCRREYTI CNWKVFCDNYLDGGYHVPYAH GLASGLKL+SYS T FE+VSIQ CEG
Sbjct: 237  LSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLDSYSITMFERVSIQSCEG 296

Query: 727  GSIDDEHDYDRLGSKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVIFDYFLIPSLK 906
             S  ++ +YDRLG KAIYAF+YPNFMINRYGPWMDTNLV+PLGPNKCQVIFDY+L  SLK
Sbjct: 297  SSEKNKGNYDRLGRKAIYAFVYPNFMINRYGPWMDTNLVVPLGPNKCQVIFDYYLEHSLK 356

Query: 907  DDRAFIEKSLEESEKVQIEDIALCEGVQKGLESPTYCTGRYAPTVEKAMHHFHCLLYENL 1086
            DD+ FIEKSL++SEKVQIEDI LCEGVQKGL+SP Y  GRYAPTVE+AMHHFHCLLYENL
Sbjct: 357  DDKDFIEKSLQDSEKVQIEDIVLCEGVQKGLQSPAYRVGRYAPTVEQAMHHFHCLLYENL 416

Query: 1087 AK 1092
            AK
Sbjct: 417  AK 418


>ref|XP_002518256.1| choline monooxygenase, putative [Ricinus communis]
            gi|223542603|gb|EEF44142.1| choline monooxygenase,
            putative [Ricinus communis]
          Length = 417

 Score =  590 bits (1522), Expect = e-166
 Identities = 263/360 (73%), Positives = 313/360 (86%)
 Frame = +1

Query: 7    FDPKIPLEKAQTPPSSWYTDPSFHDLELHRVFYRGWQAVGYTEQMKNPHDFFTGRLGSVQ 186
            FDP IP+E+A TPPSSWYTDPSF+D ELH VFY+GWQAVG+T+Q+K+P DFFTGRLG+V+
Sbjct: 56   FDPHIPVEEAFTPPSSWYTDPSFYDYELHCVFYKGWQAVGFTKQIKSPRDFFTGRLGNVE 115

Query: 187  FVICRDANGKIHAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYGLDGVLLKATRISEIQ 366
            FV+CRD NGK+HAFHNVCRHH S+LASG G+KSCFVCPYH WTYGLDG LLKATRI+ +Q
Sbjct: 116  FVVCRDDNGKVHAFHNVCRHHGSVLASGCGQKSCFVCPYHAWTYGLDGALLKATRITGMQ 175

Query: 367  NFNVNDFGLIPLQVAIWGPFILINVDNDIQPQQEARCKVVASDWLGSCSEILSTNGIDSS 546
            NF+++++GL+P+ VA WGPF+L+NVD +  PQQE    +V ++WLGSCS +L TNG+DSS
Sbjct: 176  NFSLDEYGLLPINVAAWGPFVLLNVDRESSPQQEVDGNMVENEWLGSCSGLLKTNGVDSS 235

Query: 547  LSFVCRREYTINCNWKVFCDNYLDGGYHVPYAHTGLASGLKLESYSTTTFEKVSIQICEG 726
            LS+VCRR Y I CNWKVFCDNYLDGGYHVP+AH  LASGLKL+SYSTT FE+ SIQ CEG
Sbjct: 236  LSYVCRRTYNIECNWKVFCDNYLDGGYHVPFAHKSLASGLKLDSYSTTIFERASIQKCEG 295

Query: 727  GSIDDEHDYDRLGSKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVIFDYFLIPSLK 906
            GS+    ++DRLGSKAIYAFI+PNFMINRYGPWMDTNLVLPLGP+KCQVIFDYF+    K
Sbjct: 296  GSMGSVDEFDRLGSKAIYAFIFPNFMINRYGPWMDTNLVLPLGPSKCQVIFDYFVEADYK 355

Query: 907  DDRAFIEKSLEESEKVQIEDIALCEGVQKGLESPTYCTGRYAPTVEKAMHHFHCLLYENL 1086
            +D+ FI++SL +SE+VQ+EDI LCEGVQ+GLESP YC GRYAPTVEKAMHHFH LL+  L
Sbjct: 356  NDKTFIDRSLIDSERVQMEDIMLCEGVQRGLESPAYCRGRYAPTVEKAMHHFHQLLHGKL 415


Top