BLASTX nr result

ID: Cimicifuga21_contig00027340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027340
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511682.1| beta-tubulin cofactor d, putative [Ricinus c...   164   5e-39
ref|XP_002274584.2| PREDICTED: tubulin-specific chaperone D isof...   162   2e-38
ref|XP_003633922.1| PREDICTED: tubulin-specific chaperone D isof...   162   2e-38
emb|CBI38891.3| unnamed protein product [Vitis vinifera]              162   2e-38
ref|XP_002320715.1| tubulin folding cofactor [Populus trichocarp...   155   4e-36

>ref|XP_002511682.1| beta-tubulin cofactor d, putative [Ricinus communis]
            gi|223548862|gb|EEF50351.1| beta-tubulin cofactor d,
            putative [Ricinus communis]
          Length = 1260

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/112 (67%), Positives = 93/112 (83%)
 Frame = -3

Query: 337  LFNKNICIPCIPHREKLEEIVTSGADTKWAAPTFSYPRFVQLLQFSCYSRYVLSGLVISV 158
            L+NK I +P IPHREKLEE+V + AD +W+ PT SYPRF+QLLQFSCYSR VLSGLV+S+
Sbjct: 969  LYNKTIFVPFIPHREKLEEVVPNEADLQWSVPTISYPRFIQLLQFSCYSRAVLSGLVVSI 1028

Query: 157  GGLQDSLRKASITALMEYLQLTKNEEHQGRSSREYMLGTDILWVLGEYKRCD 2
            GGLQDSLRKASI+AL++YLQ  + E+   R SREYM+  DILWVL +YK+CD
Sbjct: 1029 GGLQDSLRKASISALLDYLQAVETEDPNERRSREYMVSADILWVLQQYKKCD 1080


>ref|XP_002274584.2| PREDICTED: tubulin-specific chaperone D isoform 1 [Vitis vinifera]
          Length = 1269

 Score =  162 bits (411), Expect = 2e-38
 Identities = 84/112 (75%), Positives = 91/112 (81%)
 Frame = -3

Query: 337  LFNKNICIPCIPHREKLEEIVTSGADTKWAAPTFSYPRFVQLLQFSCYSRYVLSGLVISV 158
            L NK   IP IP+REKLEEIV +  D KW  PTFSYPRFVQLLQFSCYSR VLSGLVIS+
Sbjct: 978  LHNKMFFIPFIPYREKLEEIVPNEVDLKWGVPTFSYPRFVQLLQFSCYSRSVLSGLVISI 1037

Query: 157  GGLQDSLRKASITALMEYLQLTKNEEHQGRSSREYMLGTDILWVLGEYKRCD 2
            GGLQDSLRKASITAL+EYLQ  + E  +G SSREY L TDILWVL +YKRCD
Sbjct: 1038 GGLQDSLRKASITALLEYLQSPETEHTEG-SSREYELCTDILWVLQQYKRCD 1088


>ref|XP_003633922.1| PREDICTED: tubulin-specific chaperone D isoform 2 [Vitis vinifera]
          Length = 1228

 Score =  162 bits (411), Expect = 2e-38
 Identities = 84/112 (75%), Positives = 91/112 (81%)
 Frame = -3

Query: 337  LFNKNICIPCIPHREKLEEIVTSGADTKWAAPTFSYPRFVQLLQFSCYSRYVLSGLVISV 158
            L NK   IP IP+REKLEEIV +  D KW  PTFSYPRFVQLLQFSCYSR VLSGLVIS+
Sbjct: 937  LHNKMFFIPFIPYREKLEEIVPNEVDLKWGVPTFSYPRFVQLLQFSCYSRSVLSGLVISI 996

Query: 157  GGLQDSLRKASITALMEYLQLTKNEEHQGRSSREYMLGTDILWVLGEYKRCD 2
            GGLQDSLRKASITAL+EYLQ  + E  +G SSREY L TDILWVL +YKRCD
Sbjct: 997  GGLQDSLRKASITALLEYLQSPETEHTEG-SSREYELCTDILWVLQQYKRCD 1047


>emb|CBI38891.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  162 bits (411), Expect = 2e-38
 Identities = 84/112 (75%), Positives = 91/112 (81%)
 Frame = -3

Query: 337  LFNKNICIPCIPHREKLEEIVTSGADTKWAAPTFSYPRFVQLLQFSCYSRYVLSGLVISV 158
            L NK   IP IP+REKLEEIV +  D KW  PTFSYPRFVQLLQFSCYSR VLSGLVIS+
Sbjct: 964  LHNKMFFIPFIPYREKLEEIVPNEVDLKWGVPTFSYPRFVQLLQFSCYSRSVLSGLVISI 1023

Query: 157  GGLQDSLRKASITALMEYLQLTKNEEHQGRSSREYMLGTDILWVLGEYKRCD 2
            GGLQDSLRKASITAL+EYLQ  + E  +G SSREY L TDILWVL +YKRCD
Sbjct: 1024 GGLQDSLRKASITALLEYLQSPETEHTEG-SSREYELCTDILWVLQQYKRCD 1074


>ref|XP_002320715.1| tubulin folding cofactor [Populus trichocarpa]
            gi|222861488|gb|EEE99030.1| tubulin folding cofactor
            [Populus trichocarpa]
          Length = 1253

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/112 (67%), Positives = 89/112 (79%)
 Frame = -3

Query: 337  LFNKNICIPCIPHREKLEEIVTSGADTKWAAPTFSYPRFVQLLQFSCYSRYVLSGLVISV 158
            L+NK I IP IP+RE LEEIV +  D KW  PTFSY RFVQLL+FSCYSR VLSGLVIS+
Sbjct: 961  LYNKAIFIPFIPYRENLEEIVPNETDLKWGVPTFSYQRFVQLLRFSCYSRPVLSGLVISI 1020

Query: 157  GGLQDSLRKASITALMEYLQLTKNEEHQGRSSREYMLGTDILWVLGEYKRCD 2
            GGLQDSLRK SI+AL++YLQ  + EE   R SRE+ML  D+LWVL +YK+CD
Sbjct: 1021 GGLQDSLRKTSISALLKYLQPVETEESNERRSREHMLSADMLWVLQQYKKCD 1072


Top