BLASTX nr result
ID: Cimicifuga21_contig00027329
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00027329 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521323.1| conserved hypothetical protein [Ricinus comm... 97 1e-18 ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|2... 94 9e-18 ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 gb|AFK36710.1| unknown [Lotus japonicus] 87 1e-15 >ref|XP_002521323.1| conserved hypothetical protein [Ricinus communis] gi|223539401|gb|EEF40991.1| conserved hypothetical protein [Ricinus communis] Length = 123 Score = 97.4 bits (241), Expect = 1e-18 Identities = 59/117 (50%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = -3 Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDSHHYDTR-WNSSLYLPMVLGGLIIAIRXXX 207 Q SSQR+ LSPLYV RR D Y+T+ WNS LP+VLGGLIIAIR Sbjct: 9 QNSSQRALAMVLALVSAVVLSPLYVQRRNDMRFYETKYWNSGFVLPVVLGGLIIAIRTTS 68 Query: 206 XXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36 S+ GA G + + D S VLR GSSSWGLAG LSWQ SVQEF W+ Sbjct: 69 SSSSTSL--GATGSLIPTPDPSWVLRIGSSSWGLAGIIVMLMLVLSWQESVQEFFWK 123 >ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|222841565|gb|EEE79112.1| predicted protein [Populus trichocarpa] Length = 128 Score = 94.4 bits (233), Expect = 9e-18 Identities = 58/119 (48%), Positives = 65/119 (54%), Gaps = 3/119 (2%) Frame = -3 Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDS---HHYDTRWNSSLYLPMVLGGLIIAIRX 213 Q SSQR LSPLYV R+ D +Y+T+W+S LPMVL GLIIAIR Sbjct: 12 QNSSQRVLAMVFALASAVVLSPLYVKRKNDHTRYFNYETKWSSGFVLPMVLAGLIIAIRT 71 Query: 212 XXXXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36 +RG+R S D S VLR GSSSWGLAG LSWQ SVQEF WR Sbjct: 72 TSSSMSA--RRGSRASFIPSPDPSWVLRIGSSSWGLAGVLVMLMLVLSWQDSVQEFFWR 128 >ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|222874559|gb|EEF11690.1| predicted protein [Populus trichocarpa] Length = 128 Score = 91.7 bits (226), Expect = 6e-17 Identities = 57/119 (47%), Positives = 63/119 (52%), Gaps = 3/119 (2%) Frame = -3 Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDS---HHYDTRWNSSLYLPMVLGGLIIAIRX 213 Q SSQR LSPLYV R+ D +Y+T W+S LPMVL GLIIAIR Sbjct: 12 QNSSQRVLAMVFALASAVVLSPLYVKRKNDHTRYFNYETNWSSGFVLPMVLAGLIIAIRT 71 Query: 212 XXXXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36 +RG+R S D S VLR GSS WGLAG LSWQ SVQEF WR Sbjct: 72 TSSSMSA--RRGSRASFIPSPDPSWVLRIGSSPWGLAGVLVMLMLVLSWQDSVQEFFWR 128 >ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|222846846|gb|EEE84393.1| predicted protein [Populus trichocarpa] Length = 127 Score = 91.7 bits (226), Expect = 6e-17 Identities = 57/119 (47%), Positives = 64/119 (53%), Gaps = 3/119 (2%) Frame = -3 Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDSHHY---DTRWNSSLYLPMVLGGLIIAIRX 213 + SSQR+ LSPLYV R+ D Y +T+W+S LPMVL GLIIAIR Sbjct: 11 RNSSQRALAMVLALASAVVLSPLYVKRKNDHTGYFNHETKWSSGFVLPMVLAGLIIAIRT 70 Query: 212 XXXXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36 + RGA S D S VLR GSSSWGLAG LSWQ SVQEF WR Sbjct: 71 TSSSMS--VHRGAAASFIPSPDPSWVLRIGSSSWGLAGVLVMLVLVLSWQDSVQEFFWR 127 >gb|AFK36710.1| unknown [Lotus japonicus] Length = 124 Score = 87.0 bits (214), Expect = 1e-15 Identities = 50/114 (43%), Positives = 60/114 (52%) Frame = -3 Query: 377 SSQRSXXXXXXXXXXXXLSPLYVTRRTDSHHYDTRWNSSLYLPMVLGGLIIAIRXXXXXX 198 SSQRS LSPLY R+D HY+++W+S LPMVL GLIIAIR Sbjct: 13 SSQRSLGIVMALVSAVVLSPLYANSRSDRRHYESKWSSGFVLPMVLAGLIIAIRTTSSSR 72 Query: 197 XXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36 R + S + S VLR GSSSWGLA +W++SVQEF WR Sbjct: 73 SSV--SSPRASLLPSPEPSWVLRIGSSSWGLAMVLVMLMLVHNWKASVQEFFWR 124