BLASTX nr result

ID: Cimicifuga21_contig00027329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027329
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521323.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|AFK36710.1| unknown [Lotus japonicus]                               87   1e-15

>ref|XP_002521323.1| conserved hypothetical protein [Ricinus communis]
           gi|223539401|gb|EEF40991.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 59/117 (50%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -3

Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDSHHYDTR-WNSSLYLPMVLGGLIIAIRXXX 207
           Q SSQR+            LSPLYV RR D   Y+T+ WNS   LP+VLGGLIIAIR   
Sbjct: 9   QNSSQRALAMVLALVSAVVLSPLYVQRRNDMRFYETKYWNSGFVLPVVLGGLIIAIRTTS 68

Query: 206 XXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36
                S+  GA G +  + D S VLR GSSSWGLAG        LSWQ SVQEF W+
Sbjct: 69  SSSSTSL--GATGSLIPTPDPSWVLRIGSSSWGLAGIIVMLMLVLSWQESVQEFFWK 123


>ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|222841565|gb|EEE79112.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 58/119 (48%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
 Frame = -3

Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDS---HHYDTRWNSSLYLPMVLGGLIIAIRX 213
           Q SSQR             LSPLYV R+ D     +Y+T+W+S   LPMVL GLIIAIR 
Sbjct: 12  QNSSQRVLAMVFALASAVVLSPLYVKRKNDHTRYFNYETKWSSGFVLPMVLAGLIIAIRT 71

Query: 212 XXXXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36
                    +RG+R     S D S VLR GSSSWGLAG        LSWQ SVQEF WR
Sbjct: 72  TSSSMSA--RRGSRASFIPSPDPSWVLRIGSSSWGLAGVLVMLMLVLSWQDSVQEFFWR 128


>ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|222874559|gb|EEF11690.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 57/119 (47%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
 Frame = -3

Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDS---HHYDTRWNSSLYLPMVLGGLIIAIRX 213
           Q SSQR             LSPLYV R+ D     +Y+T W+S   LPMVL GLIIAIR 
Sbjct: 12  QNSSQRVLAMVFALASAVVLSPLYVKRKNDHTRYFNYETNWSSGFVLPMVLAGLIIAIRT 71

Query: 212 XXXXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36
                    +RG+R     S D S VLR GSS WGLAG        LSWQ SVQEF WR
Sbjct: 72  TSSSMSA--RRGSRASFIPSPDPSWVLRIGSSPWGLAGVLVMLMLVLSWQDSVQEFFWR 128


>ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|222846846|gb|EEE84393.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 57/119 (47%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
 Frame = -3

Query: 383 QKSSQRSXXXXXXXXXXXXLSPLYVTRRTDSHHY---DTRWNSSLYLPMVLGGLIIAIRX 213
           + SSQR+            LSPLYV R+ D   Y   +T+W+S   LPMVL GLIIAIR 
Sbjct: 11  RNSSQRALAMVLALASAVVLSPLYVKRKNDHTGYFNHETKWSSGFVLPMVLAGLIIAIRT 70

Query: 212 XXXXXXXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36
                   + RGA      S D S VLR GSSSWGLAG        LSWQ SVQEF WR
Sbjct: 71  TSSSMS--VHRGAAASFIPSPDPSWVLRIGSSSWGLAGVLVMLVLVLSWQDSVQEFFWR 127


>gb|AFK36710.1| unknown [Lotus japonicus]
          Length = 124

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/114 (43%), Positives = 60/114 (52%)
 Frame = -3

Query: 377 SSQRSXXXXXXXXXXXXLSPLYVTRRTDSHHYDTRWNSSLYLPMVLGGLIIAIRXXXXXX 198
           SSQRS            LSPLY   R+D  HY+++W+S   LPMVL GLIIAIR      
Sbjct: 13  SSQRSLGIVMALVSAVVLSPLYANSRSDRRHYESKWSSGFVLPMVLAGLIIAIRTTSSSR 72

Query: 197 XXSMQRGARGPIFSSMDSSSVLRFGSSSWGLAGXXXXXXXXLSWQSSVQEFLWR 36
                   R  +  S + S VLR GSSSWGLA          +W++SVQEF WR
Sbjct: 73  SSV--SSPRASLLPSPEPSWVLRIGSSSWGLAMVLVMLMLVHNWKASVQEFFWR 124


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