BLASTX nr result

ID: Cimicifuga21_contig00027327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027327
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307448.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_003544702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    83   3e-14
emb|CBI18994.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_003602037.1| RING finger protein [Medicago truncatula] gi...    81   1e-13
ref|XP_002300971.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>ref|XP_002307448.1| predicted protein [Populus trichocarpa] gi|222856897|gb|EEE94444.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/67 (59%), Positives = 52/67 (77%)
 Frame = +2

Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364
           LSYEELIALGE +G E +GLS +EI++CLH + Y+   + K G D+CVICQ EYEE+E++
Sbjct: 109 LSYEELIALGEFIGQEKRGLSVNEISTCLHPWKYRSLAN-KTGTDRCVICQMEYEEDESL 167

Query: 365 VALGCQH 385
           VAL C H
Sbjct: 168 VALSCDH 174


>ref|XP_003544702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 205

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/67 (55%), Positives = 51/67 (76%)
 Frame = +2

Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364
           L+YEELI LG+ +G E +GLSA EI SCLH++++    + K G D+CVICQ EYEE E++
Sbjct: 109 LTYEELIELGDFIGQEKRGLSAHEICSCLHSHTF-HSAENKSGIDRCVICQVEYEEGESL 167

Query: 365 VALGCQH 385
           VA+ C+H
Sbjct: 168 VAIQCEH 174


>emb|CBI18994.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 54/137 (39%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
 Frame = +2

Query: 8   SDMALAVALQQQERELMNLMM-----------SXXXXXXXXXXXXXXXXXXXVGSXXXXX 154
           SD ALA+ALQ+QER     ++                                GS     
Sbjct: 25  SDFALAIALQEQERRAFTTLLPTIFQTNSDELESDSSDETDDDEDEDKFLEGEGSNSDQD 84

Query: 155 XXXXXXXXXXLSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVIC 334
                     LSYEELIALGEIVG ES+GLS  EI++ L  Y+       K   D+CVIC
Sbjct: 85  MEEDDIDPDQLSYEELIALGEIVGEESRGLSMEEISASLRPYTC-HSLRSKTAVDRCVIC 143

Query: 335 QCEYEEEEAVVALGCQH 385
           Q EYEEEE +VAL C+H
Sbjct: 144 QVEYEEEEKLVALPCEH 160


>ref|XP_003602037.1| RING finger protein [Medicago truncatula]
           gi|355491085|gb|AES72288.1| RING finger protein
           [Medicago truncatula]
          Length = 211

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = +2

Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364
           LSYEELI LG  +G E +GL A+EI+SCLH Y+ K   +   G D+CVICQ EYEE E++
Sbjct: 113 LSYEELIELGNFIGEEKRGLPANEISSCLHPYTSK-IAESTSGIDRCVICQIEYEEGESL 171

Query: 365 VALGCQH 385
           VAL C H
Sbjct: 172 VALHCDH 178


>ref|XP_002300971.1| predicted protein [Populus trichocarpa] gi|222842697|gb|EEE80244.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/67 (58%), Positives = 49/67 (73%)
 Frame = +2

Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364
           LSYE+LIALGE VG E +GLS +EI++CL    Y+     K G D+CVICQ EYEE+E++
Sbjct: 114 LSYEDLIALGEFVGQEKRGLSRNEISTCLRPCKYESLAS-KTGTDRCVICQMEYEEDESL 172

Query: 365 VALGCQH 385
           VAL C H
Sbjct: 173 VALSCDH 179


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