BLASTX nr result
ID: Cimicifuga21_contig00027327
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00027327 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307448.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|XP_003544702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l... 83 3e-14 emb|CBI18994.3| unnamed protein product [Vitis vinifera] 82 3e-14 ref|XP_003602037.1| RING finger protein [Medicago truncatula] gi... 81 1e-13 ref|XP_002300971.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13 >ref|XP_002307448.1| predicted protein [Populus trichocarpa] gi|222856897|gb|EEE94444.1| predicted protein [Populus trichocarpa] Length = 208 Score = 87.4 bits (215), Expect = 1e-15 Identities = 40/67 (59%), Positives = 52/67 (77%) Frame = +2 Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364 LSYEELIALGE +G E +GLS +EI++CLH + Y+ + K G D+CVICQ EYEE+E++ Sbjct: 109 LSYEELIALGEFIGQEKRGLSVNEISTCLHPWKYRSLAN-KTGTDRCVICQMEYEEDESL 167 Query: 365 VALGCQH 385 VAL C H Sbjct: 168 VALSCDH 174 >ref|XP_003544702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max] Length = 205 Score = 82.8 bits (203), Expect = 3e-14 Identities = 37/67 (55%), Positives = 51/67 (76%) Frame = +2 Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364 L+YEELI LG+ +G E +GLSA EI SCLH++++ + K G D+CVICQ EYEE E++ Sbjct: 109 LTYEELIELGDFIGQEKRGLSAHEICSCLHSHTF-HSAENKSGIDRCVICQVEYEEGESL 167 Query: 365 VALGCQH 385 VA+ C+H Sbjct: 168 VAIQCEH 174 >emb|CBI18994.3| unnamed protein product [Vitis vinifera] Length = 188 Score = 82.4 bits (202), Expect = 3e-14 Identities = 54/137 (39%), Positives = 65/137 (47%), Gaps = 11/137 (8%) Frame = +2 Query: 8 SDMALAVALQQQERELMNLMM-----------SXXXXXXXXXXXXXXXXXXXVGSXXXXX 154 SD ALA+ALQ+QER ++ GS Sbjct: 25 SDFALAIALQEQERRAFTTLLPTIFQTNSDELESDSSDETDDDEDEDKFLEGEGSNSDQD 84 Query: 155 XXXXXXXXXXLSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVIC 334 LSYEELIALGEIVG ES+GLS EI++ L Y+ K D+CVIC Sbjct: 85 MEEDDIDPDQLSYEELIALGEIVGEESRGLSMEEISASLRPYTC-HSLRSKTAVDRCVIC 143 Query: 335 QCEYEEEEAVVALGCQH 385 Q EYEEEE +VAL C+H Sbjct: 144 QVEYEEEEKLVALPCEH 160 >ref|XP_003602037.1| RING finger protein [Medicago truncatula] gi|355491085|gb|AES72288.1| RING finger protein [Medicago truncatula] Length = 211 Score = 80.9 bits (198), Expect = 1e-13 Identities = 39/67 (58%), Positives = 48/67 (71%) Frame = +2 Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364 LSYEELI LG +G E +GL A+EI+SCLH Y+ K + G D+CVICQ EYEE E++ Sbjct: 113 LSYEELIELGNFIGEEKRGLPANEISSCLHPYTSK-IAESTSGIDRCVICQIEYEEGESL 171 Query: 365 VALGCQH 385 VAL C H Sbjct: 172 VALHCDH 178 >ref|XP_002300971.1| predicted protein [Populus trichocarpa] gi|222842697|gb|EEE80244.1| predicted protein [Populus trichocarpa] Length = 210 Score = 80.9 bits (198), Expect = 1e-13 Identities = 39/67 (58%), Positives = 49/67 (73%) Frame = +2 Query: 185 LSYEELIALGEIVGTESKGLSASEIASCLHAYSYKRQTDCKDGFDQCVICQCEYEEEEAV 364 LSYE+LIALGE VG E +GLS +EI++CL Y+ K G D+CVICQ EYEE+E++ Sbjct: 114 LSYEDLIALGEFVGQEKRGLSRNEISTCLRPCKYESLAS-KTGTDRCVICQMEYEEDESL 172 Query: 365 VALGCQH 385 VAL C H Sbjct: 173 VALSCDH 179