BLASTX nr result

ID: Cimicifuga21_contig00027319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027319
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31721.3| unnamed protein product [Vitis vinifera]               57   4e-06

>emb|CBI31721.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
 Frame = +3

Query: 156 LLHNLKWLK-VGTSFSDNEILLMNTMLGRCPQIETVFLEIEVGKDVCDTSTGELLKVEKM 332
           LL+NLK L  +  S   ++I  + + +  CP +E +F+ I+     C+ S G      + 
Sbjct: 327 LLNNLKELWWIDNSMEKHKIEALASFMKLCPYLEKLFITIDP-TSYCNPSKGHC----RF 381

Query: 333 WIKY--------KLCQLKLVEIQGFRGSENEVKFVKFLLENAIVLENLIITTSKSEGASG 488
           W++Y        +L  L++V+++GF   E+E    ++LLE  +  E +IIT  K  G S 
Sbjct: 382 WMEYSSRVASNTRLVNLRMVKMEGFTNPEDERLLAEYLLEKVVSTEPIIITAPKENGCS- 440

Query: 489 NDQEMTNLGRKLLKFPRASS 548
                 N  +KL+K P + +
Sbjct: 441 -----KNCTQKLVKIPHSKA 455


Top