BLASTX nr result

ID: Cimicifuga21_contig00027317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027317
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   307   5e-82
ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   307   5e-82
gb|ABR16179.1| unknown [Picea sitchensis]                             307   5e-82
gb|AFZ78552.1| cellulose synthase [Populus tomentosa]                 307   7e-82
ref|XP_002316815.1| cellulose synthase [Populus trichocarpa] gi|...   307   7e-82

>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score =  307 bits (787), Expect = 5e-82
 Identities = 142/153 (92%), Positives = 149/153 (97%)
 Frame = +3

Query: 3    REYEEYKVRVNALVAKAQKTPDEGWTMQDGTAWPGNNTRDHPGMIQVFLGNTGAHDIEGN 182
            R YEE+KVRVNALVAKAQKTPDEGW+MQDGTAWPGNN RDHPGMIQVFLGNTGAHDIEGN
Sbjct: 764  RAYEEFKVRVNALVAKAQKTPDEGWSMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDIEGN 823

Query: 183  ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAILTNAPYILNLDCDHYVNNSQAVREGM 362
            ELPRLVYVSREKRPGYQHHKKAGA NALVRVSA+LTNAP+ILNLDCDHYVNNSQA+RE M
Sbjct: 824  ELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAM 883

Query: 363  CFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANR 461
            CF+MDPQVGRDVCYVQFPQRFDGID+SDRYANR
Sbjct: 884  CFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANR 916


>ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1362

 Score =  307 bits (787), Expect = 5e-82
 Identities = 142/153 (92%), Positives = 149/153 (97%)
 Frame = +3

Query: 3    REYEEYKVRVNALVAKAQKTPDEGWTMQDGTAWPGNNTRDHPGMIQVFLGNTGAHDIEGN 182
            R YEE+KVRVNALVAKAQKTPDEGW+MQDGTAWPGNN RDHPGMIQVFLGNTGAHDIEGN
Sbjct: 736  RAYEEFKVRVNALVAKAQKTPDEGWSMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDIEGN 795

Query: 183  ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAILTNAPYILNLDCDHYVNNSQAVREGM 362
            ELPRLVYVSREKRPGYQHHKKAGA NALVRVSA+LTNAP+ILNLDCDHYVNNSQA+RE M
Sbjct: 796  ELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAM 855

Query: 363  CFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANR 461
            CF+MDPQVGRDVCYVQFPQRFDGID+SDRYANR
Sbjct: 856  CFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANR 888


>gb|ABR16179.1| unknown [Picea sitchensis]
          Length = 546

 Score =  307 bits (787), Expect = 5e-82
 Identities = 140/153 (91%), Positives = 151/153 (98%)
 Frame = +3

Query: 3   REYEEYKVRVNALVAKAQKTPDEGWTMQDGTAWPGNNTRDHPGMIQVFLGNTGAHDIEGN 182
           REYEEYKVR+NALVAKA+KTPDEGW MQDGT+WPGNN+RDHPGMIQVFLG+TGAHD+EGN
Sbjct: 362 REYEEYKVRINALVAKARKTPDEGWIMQDGTSWPGNNSRDHPGMIQVFLGHTGAHDVEGN 421

Query: 183 ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAILTNAPYILNLDCDHYVNNSQAVREGM 362
           ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSA+LTNAPY+LNLDCDHYVNNS+AVRE M
Sbjct: 422 ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPYLLNLDCDHYVNNSKAVREAM 481

Query: 363 CFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANR 461
           CFMMDPQVGR+VCYVQFPQRFDGID+SDRYANR
Sbjct: 482 CFMMDPQVGRNVCYVQFPQRFDGIDRSDRYANR 514


>gb|AFZ78552.1| cellulose synthase [Populus tomentosa]
          Length = 977

 Score =  307 bits (786), Expect = 7e-82
 Identities = 143/153 (93%), Positives = 148/153 (96%)
 Frame = +3

Query: 3   REYEEYKVRVNALVAKAQKTPDEGWTMQDGTAWPGNNTRDHPGMIQVFLGNTGAHDIEGN 182
           R+YEEYKVRVNALVAKAQKTPDEGWTMQDGT WPGNNTRDHPGMIQVFLGNTGA DIEGN
Sbjct: 356 RDYEEYKVRVNALVAKAQKTPDEGWTMQDGTPWPGNNTRDHPGMIQVFLGNTGARDIEGN 415

Query: 183 ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAILTNAPYILNLDCDHYVNNSQAVREGM 362
           ELPRLVYVSREKRPGYQHHKKAGA NALVRVSA+LTNAPYILNLDCDHYVNNS+AVRE M
Sbjct: 416 ELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAM 475

Query: 363 CFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANR 461
           C +MDPQVGRDVCYVQFPQRFDGID+SDRYANR
Sbjct: 476 CILMDPQVGRDVCYVQFPQRFDGIDRSDRYANR 508


>ref|XP_002316815.1| cellulose synthase [Populus trichocarpa]
           gi|222859880|gb|EEE97427.1| cellulose synthase [Populus
           trichocarpa]
          Length = 978

 Score =  307 bits (786), Expect = 7e-82
 Identities = 143/153 (93%), Positives = 148/153 (96%)
 Frame = +3

Query: 3   REYEEYKVRVNALVAKAQKTPDEGWTMQDGTAWPGNNTRDHPGMIQVFLGNTGAHDIEGN 182
           R+YEEYKVRVNALVAKAQKTPDEGWTMQDGT WPGNNTRDHPGMIQVFLGNTGA DIEGN
Sbjct: 356 RDYEEYKVRVNALVAKAQKTPDEGWTMQDGTPWPGNNTRDHPGMIQVFLGNTGARDIEGN 415

Query: 183 ELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAILTNAPYILNLDCDHYVNNSQAVREGM 362
           ELPRLVYVSREKRPGYQHHKKAGA NALVRVSA+LTNAPYILNLDCDHYVNNS+AVRE M
Sbjct: 416 ELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAM 475

Query: 363 CFMMDPQVGRDVCYVQFPQRFDGIDKSDRYANR 461
           C +MDPQVGRDVCYVQFPQRFDGID+SDRYANR
Sbjct: 476 CILMDPQVGRDVCYVQFPQRFDGIDRSDRYANR 508


Top