BLASTX nr result

ID: Cimicifuga21_contig00027304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027304
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71342.1| hypothetical protein VITISV_002439 [Vitis vinifera]    60   2e-17
emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]    60   1e-16
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    55   5e-16
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    59   1e-15
emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]    56   1e-15

>emb|CAN71342.1| hypothetical protein VITISV_002439 [Vitis vinifera]
          Length = 860

 Score = 59.7 bits (143), Expect(2) = 2e-17
 Identities = 27/59 (45%), Positives = 37/59 (62%)
 Frame = -3

Query: 416 LSNCSIYFMFIFSISKGVAEKINGIIRNFLWADLEELHKYHLVTWSLVCSSRNAGVLGL 240
           LSN  IYFM +F I + V  ++  I R FLW D++E  K HLV W+++C  +  G LGL
Sbjct: 653 LSNLPIYFMSLFVIRRKVRLRLEKIQREFLWGDMDERKKIHLVRWAVICKDKRHGGLGL 711



 Score = 53.9 bits (128), Expect(2) = 2e-17
 Identities = 29/70 (41%), Positives = 38/70 (54%)
 Frame = -2

Query: 255 GSAGVVNIFSFNEAIIGK*LWRFGRETGSFWRNVIVSK*GSHQLGRESGLVRTPYVCRVW 76
           G  G+ ++  FN A++GK LWRF  E GSFWR VIV K G  + G  +  VR  Y   + 
Sbjct: 707 GGLGLRHLKDFNNALLGKWLWRFPLERGSFWRKVIVGKFGEKEGGWTTREVRESYGMGLR 766

Query: 75  RGIMNVLSRF 46
           +GI      F
Sbjct: 767 KGIRKCWEEF 776


>emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]
          Length = 873

 Score = 59.7 bits (143), Expect(2) = 1e-16
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = -3

Query: 416 LSNCSIYFMFIFSISKGVAEKINGIIRNFLWADLEELHKYHLVTWSLVCSSRNAGVLGL 240
           LSN  IYFM +F I + V  ++  I R FLW D+EE  K HLV W ++C     G LGL
Sbjct: 489 LSNLPIYFMSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVRWEVICKDMRHGGLGL 547



 Score = 51.6 bits (122), Expect(2) = 1e-16
 Identities = 28/63 (44%), Positives = 35/63 (55%)
 Frame = -2

Query: 255 GSAGVVNIFSFNEAIIGK*LWRFGRETGSFWRNVIVSK*GSHQLGRESGLVRTPYVCRVW 76
           G  G+  +  FN A++GK LWRF  E  SFWR VIV K G  Q G  +  VR  Y   +W
Sbjct: 543 GGLGLRYLKDFNHALLGKWLWRFPIERESFWRRVIVGKFGEVQGGWTTREVRESYGTGLW 602

Query: 75  RGI 67
           + I
Sbjct: 603 KDI 605


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 55.5 bits (132), Expect(2) = 5e-16
 Identities = 25/59 (42%), Positives = 35/59 (59%)
 Frame = -3

Query: 416 LSNCSIYFMFIFSISKGVAEKINGIIRNFLWADLEELHKYHLVTWSLVCSSRNAGVLGL 240
           LSN  IYFM +F + + V  ++  I R FLW D+E   + HLV W+ +C  +  G LGL
Sbjct: 436 LSNLPIYFMSLFVLPRKVRIRLEKIQREFLWGDVEGRRRIHLVRWTAICKDKKYGGLGL 494



 Score = 53.5 bits (127), Expect(2) = 5e-16
 Identities = 27/63 (42%), Positives = 36/63 (57%)
 Frame = -2

Query: 255 GSAGVVNIFSFNEAIIGK*LWRFGRETGSFWRNVIVSK*GSHQLGRESGLVRTPYVCRVW 76
           G  G+ ++  FN A++GK LWRF  E  SFWR VIV K G  + G  +  VR  Y   +W
Sbjct: 490 GGLGLRHLKEFNHALLGKWLWRFSLERESFWRKVIVGKFGEGEGGWTTREVRESYGMSLW 549

Query: 75  RGI 67
           + I
Sbjct: 550 KDI 552


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 58.5 bits (140), Expect(2) = 1e-15
 Identities = 28/59 (47%), Positives = 34/59 (57%)
 Frame = -3

Query: 416 LSNCSIYFMFIFSISKGVAEKINGIIRNFLWADLEELHKYHLVTWSLVCSSRNAGVLGL 240
           LSN  IYFM +F I + V  ++  I R FLW D+EE  K HLV W + C     G LGL
Sbjct: 786 LSNLPIYFMSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVRWEVTCKDMRHGGLGL 844



 Score = 49.3 bits (116), Expect(2) = 1e-15
 Identities = 27/63 (42%), Positives = 34/63 (53%)
 Frame = -2

Query: 255  GSAGVVNIFSFNEAIIGK*LWRFGRETGSFWRNVIVSK*GSHQLGRESGLVRTPYVCRVW 76
            G  G+  +  FN A++GK LWRF  E  S WR VIV K G  Q G  +  VR  Y   +W
Sbjct: 840  GGLGLRYLKDFNHALLGKWLWRFPIERESLWRRVIVGKFGEVQGGWTTREVRESYGTGLW 899

Query: 75   RGI 67
            + I
Sbjct: 900  KDI 902


>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score = 56.2 bits (134), Expect(2) = 1e-15
 Identities = 26/59 (44%), Positives = 35/59 (59%)
 Frame = -3

Query: 416 LSNCSIYFMFIFSISKGVAEKINGIIRNFLWADLEELHKYHLVTWSLVCSSRNAGVLGL 240
           LSN  IYFM +F I + V  ++  I R FLW D+E   + HLV W+ +C  +  G LGL
Sbjct: 94  LSNLPIYFMSLFVIPRKVRIRLEKIQREFLWGDVEGRRRIHLVRWTAICKDKKYGGLGL 152



 Score = 51.2 bits (121), Expect(2) = 1e-15
 Identities = 26/63 (41%), Positives = 35/63 (55%)
 Frame = -2

Query: 255 GSAGVVNIFSFNEAIIGK*LWRFGRETGSFWRNVIVSK*GSHQLGRESGLVRTPYVCRVW 76
           G  G+ ++  FN A++GK LWRF  E  S WR VIV K G  + G  +  VR  Y   +W
Sbjct: 148 GGLGLRHLKEFNHALLGKWLWRFSLERESLWRKVIVGKFGEGEGGWTTREVRESYGMSLW 207

Query: 75  RGI 67
           + I
Sbjct: 208 KDI 210


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