BLASTX nr result

ID: Cimicifuga21_contig00027300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027300
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|2...   243   3e-62
gb|AAL92170.1|AF488808_1 dynamin-like protein C [Arabidopsis tha...   242   3e-62
gb|AAF22293.1|AF180734_1 dynamin-like protein 5 [Arabidopsis tha...   242   3e-62
ref|XP_002892832.1| hypothetical protein ARALYDRAFT_888870 [Arab...   242   3e-62
ref|NP_172936.1| dynamin-related protein 1C [Arabidopsis thalian...   242   3e-62

>ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|222864894|gb|EEF02025.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  243 bits (619), Expect = 3e-62
 Identities = 120/154 (77%), Positives = 138/154 (89%), Gaps = 3/154 (1%)
 Frame = -3

Query: 609 ASTEALERFREDSRKTVLRLVEMESTYLTVEFFRKLSLEPEKGTS---NPQAPTMDRYSE 439
           A+ EALERFR++SR+TV RLV+MES+YLTVEFFRKL LEPEK T+   N   P  DRY++
Sbjct: 460 AANEALERFRDESRRTVQRLVDMESSYLTVEFFRKLHLEPEKNTNTNPNQPGPNADRYND 519

Query: 438 NHYRKIGSNVSAYIGMVCDTLRNTIPKAIVYCQVREAKRSLLNYFYSQVGRREKKQLSAM 259
           NH+R+IGSNVSAYIGMVCDTLRN+IPKA+VYCQVREAKR LLN FY+QVGRREK++L AM
Sbjct: 520 NHFRRIGSNVSAYIGMVCDTLRNSIPKAVVYCQVREAKRCLLNNFYAQVGRREKERLGAM 579

Query: 258 LDEDPQLMEKRDTIAKRLQLYKSARDEIDSVAWK 157
           LDEDPQLME+R TIAKRL+LYKSARDEIDSVAWK
Sbjct: 580 LDEDPQLMERRTTIAKRLELYKSARDEIDSVAWK 613


>gb|AAL92170.1|AF488808_1 dynamin-like protein C [Arabidopsis thaliana]
          Length = 611

 Score =  242 bits (618), Expect = 3e-62
 Identities = 118/154 (76%), Positives = 139/154 (90%), Gaps = 3/154 (1%)
 Frame = -3

Query: 609 ASTEALERFREDSRKTVLRLVEMESTYLTVEFFRKLSLEPEKGTSNPQ---APTMDRYSE 439
           A+ EALERFR++SRKTVLRLV+MES+YLTVEFFRKL LEPEK   NP+   AP  D YS+
Sbjct: 458 AANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSD 517

Query: 438 NHYRKIGSNVSAYIGMVCDTLRNTIPKAIVYCQVREAKRSLLNYFYSQVGRREKKQLSAM 259
           NH+RKIGSNVSAYI MVCDTLRN++PKA+VYCQVREAKRSLLN+FY+QVGR+EK++L AM
Sbjct: 518 NHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAM 577

Query: 258 LDEDPQLMEKRDTIAKRLQLYKSARDEIDSVAWK 157
           LDEDPQLME+R T+AKRL+LYK ARD+ID+VAWK
Sbjct: 578 LDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 611


>gb|AAF22293.1|AF180734_1 dynamin-like protein 5 [Arabidopsis thaliana]
          Length = 614

 Score =  242 bits (618), Expect = 3e-62
 Identities = 118/154 (76%), Positives = 139/154 (90%), Gaps = 3/154 (1%)
 Frame = -3

Query: 609 ASTEALERFREDSRKTVLRLVEMESTYLTVEFFRKLSLEPEKGTSNPQ---APTMDRYSE 439
           A+ EALERFR++SRKTVLRLV+MES+YLTVEFFRKL LEPEK   NP+   AP  D YS+
Sbjct: 461 AANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSD 520

Query: 438 NHYRKIGSNVSAYIGMVCDTLRNTIPKAIVYCQVREAKRSLLNYFYSQVGRREKKQLSAM 259
           NH+RKIGSNVSAYI MVCDTLRN++PKA+VYCQVREAKRSLLN+FY+QVGR+EK++L AM
Sbjct: 521 NHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAM 580

Query: 258 LDEDPQLMEKRDTIAKRLQLYKSARDEIDSVAWK 157
           LDEDPQLME+R T+AKRL+LYK ARD+ID+VAWK
Sbjct: 581 LDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 614


>ref|XP_002892832.1| hypothetical protein ARALYDRAFT_888870 [Arabidopsis lyrata subsp.
           lyrata] gi|297338674|gb|EFH69091.1| hypothetical protein
           ARALYDRAFT_888870 [Arabidopsis lyrata subsp. lyrata]
          Length = 614

 Score =  242 bits (618), Expect = 3e-62
 Identities = 118/154 (76%), Positives = 139/154 (90%), Gaps = 3/154 (1%)
 Frame = -3

Query: 609 ASTEALERFREDSRKTVLRLVEMESTYLTVEFFRKLSLEPEKGTSNPQ---APTMDRYSE 439
           A+ EALERFR++SRKTVLRLV+MES+YLTVEFFRKL LEPEK   NP+   AP  D YS+
Sbjct: 461 AANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSD 520

Query: 438 NHYRKIGSNVSAYIGMVCDTLRNTIPKAIVYCQVREAKRSLLNYFYSQVGRREKKQLSAM 259
           NH+RKIGSNVSAYI MVCDTLRN++PKA+VYCQVREAKRSLLN+FY+QVGR+EK++L AM
Sbjct: 521 NHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAM 580

Query: 258 LDEDPQLMEKRDTIAKRLQLYKSARDEIDSVAWK 157
           LDEDPQLME+R T+AKRL+LYK ARD+ID+VAWK
Sbjct: 581 LDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 614


>ref|NP_172936.1| dynamin-related protein 1C [Arabidopsis thaliana]
           gi|60392231|sp|Q8LF21.2|DRP1C_ARATH RecName:
           Full=Dynamin-related protein 1C; AltName:
           Full=Dynamin-like protein 5; AltName: Full=Dynamin-like
           protein C; AltName: Full=Dynamin-like protein DLP1
           gi|11991506|emb|CAC19656.1| dynamin-like protein DLP1
           [Arabidopsis thaliana] gi|14532662|gb|AAK64059.1|
           putative dynamin protein [Arabidopsis thaliana]
           gi|23297723|gb|AAN12911.1| putative dynamin protein
           [Arabidopsis thaliana] gi|332191111|gb|AEE29232.1|
           dynamin-related protein 1C [Arabidopsis thaliana]
          Length = 614

 Score =  242 bits (618), Expect = 3e-62
 Identities = 118/154 (76%), Positives = 139/154 (90%), Gaps = 3/154 (1%)
 Frame = -3

Query: 609 ASTEALERFREDSRKTVLRLVEMESTYLTVEFFRKLSLEPEKGTSNPQ---APTMDRYSE 439
           A+ EALERFR++SRKTVLRLV+MES+YLTVEFFRKL LEPEK   NP+   AP  D YS+
Sbjct: 461 AANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSD 520

Query: 438 NHYRKIGSNVSAYIGMVCDTLRNTIPKAIVYCQVREAKRSLLNYFYSQVGRREKKQLSAM 259
           NH+RKIGSNVSAYI MVCDTLRN++PKA+VYCQVREAKRSLLN+FY+QVGR+EK++L AM
Sbjct: 521 NHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAM 580

Query: 258 LDEDPQLMEKRDTIAKRLQLYKSARDEIDSVAWK 157
           LDEDPQLME+R T+AKRL+LYK ARD+ID+VAWK
Sbjct: 581 LDEDPQLMERRGTLAKRLELYKQARDDIDAVAWK 614


Top