BLASTX nr result

ID: Cimicifuga21_contig00027294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027294
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|2235...    98   8e-19
ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002871080.1| hypothetical protein ARALYDRAFT_908304 [Arab...    91   1e-16
gb|AAM63441.1| latex-abundant protein-like [Arabidopsis thaliana]      90   2e-16

>ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|223543463|gb|EEF44994.1|
           caspase, putative [Ricinus communis]
          Length = 325

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
 Frame = -1

Query: 302 KKSSFTIISDSCHSGGLIDKEKEQIGPCAT---NSQPLG----RPRNINMDYILDNLTSL 144
           K +SFTIISDSCHSGGLIDKEKEQIGP +T   N++ L      P++I  + IL + +SL
Sbjct: 134 KGTSFTIISDSCHSGGLIDKEKEQIGPNSTITANAENLSSHIHTPKHIPFNSILQHFSSL 193

Query: 143 SGIQSSDIGVQLVEIFGNEASTKFYQNGLQLGLSAGSIHPDSGILLS 3
           +GI +SDIG  L+E FG +AS KF    L+  L   S+ PD GILLS
Sbjct: 194 TGINTSDIGTHLLEYFGADASLKFRLQSLEQDLFE-SLKPDDGILLS 239


>ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|222853910|gb|EEE91457.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 5/105 (4%)
 Frame = -1

Query: 302 KKSSFTIISDSCHSGGLIDKEKEQIGPCATNSQ-----PLGRPRNINMDYILDNLTSLSG 138
           K +S T++SDSCHSGGLIDKEKEQIGP AT +      P   P+ I  + IL +LTSL+ 
Sbjct: 131 KGASLTVLSDSCHSGGLIDKEKEQIGPKATITTNNAKVPSQSPKVIPFESILQHLTSLTN 190

Query: 137 IQSSDIGVQLVEIFGNEASTKFYQNGLQLGLSAGSIHPDSGILLS 3
           I +SDIG  L+E FG++AS KF    L+      SI+PD GILLS
Sbjct: 191 INTSDIGTHLLEFFGSDASLKFRLPPLERD-QFESINPDEGILLS 234


>ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|222867210|gb|EEF04341.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
 Frame = -1

Query: 302 KKSSFTIISDSCHSGGLIDKEKEQIGPCAT-----NSQPLGRPRNINMDYILDNLTSLSG 138
           K +S TI+SDSCHSGGLIDKEKEQIGP AT      +     P+ I  + IL +LTSL+ 
Sbjct: 131 KGASLTILSDSCHSGGLIDKEKEQIGPNATITANNTAVHSHNPKAIPFESILQHLTSLTN 190

Query: 137 IQSSDIGVQLVEIFGNEASTKFYQNGLQLGLSAGSIHPDSGILLS 3
           I +SD+G  L+E FG++AS K+    L+  L   S+ PD GILLS
Sbjct: 191 INTSDVGTHLLEFFGSDASLKYRLPPLEWDL-FDSLKPDEGILLS 234


>ref|XP_002871080.1| hypothetical protein ARALYDRAFT_908304 [Arabidopsis lyrata subsp.
           lyrata] gi|297316917|gb|EFH47339.1| hypothetical protein
           ARALYDRAFT_908304 [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 14/114 (12%)
 Frame = -1

Query: 302 KKSSFTIISDSCHSGGLIDKEKEQIGPCATNS---------QPLGRPRNINMDYILDNLT 150
           K +SFT+ISDSCHSGGLIDKEKEQIGP + +S               R +    +LD+L+
Sbjct: 139 KGTSFTMISDSCHSGGLIDKEKEQIGPFSVSSNISPDMETTNKTITSRALPFKEVLDHLS 198

Query: 149 SLSGIQSSDIGVQLVEIFGNEASTKFYQNGLQL-----GLSAGSIHPDSGILLS 3
           SL+GI +SDIG  L+E+FG +A  KF    + L      ++A   H DSGILLS
Sbjct: 199 SLTGITTSDIGTHLLELFGGDAGLKFRLPAMDLMDLLETMTARERHVDSGILLS 252


>gb|AAM63441.1| latex-abundant protein-like [Arabidopsis thaliana]
          Length = 320

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 14/114 (12%)
 Frame = -1

Query: 302 KKSSFTIISDSCHSGGLIDKEKEQIGPCATNS---------QPLGRPRNINMDYILDNLT 150
           K +SFT+ISDSCHSGGLIDKEKEQIGP + +S               R +    +LD+L+
Sbjct: 131 KGTSFTMISDSCHSGGLIDKEKEQIGPSSVSSNISPAIETTNKTITSRALPFKAVLDHLS 190

Query: 149 SLSGIQSSDIGVQLVEIFGNEASTKFYQNGLQL-----GLSAGSIHPDSGILLS 3
           SL+GI +SDIG  L+E+FG +A  KF    + L      ++A   H DSGIL+S
Sbjct: 191 SLTGITTSDIGTHLLELFGRDAGLKFRLPAMDLMDLLETMTAREKHVDSGILMS 244


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