BLASTX nr result

ID: Cimicifuga21_contig00027289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027289
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527348.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_003615365.1| hypothetical protein MTR_5g067050 [Medicago ...    79   4e-13
emb|CBI19302.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_003603706.1| hypothetical protein MTR_3g111360 [Medicago ...    74   2e-11
ref|XP_002302358.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002527348.1| conserved hypothetical protein [Ricinus communis]
           gi|223533267|gb|EEF35020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/111 (42%), Positives = 54/111 (48%), Gaps = 37/111 (33%)
 Frame = -2

Query: 319 TMEKLSS-LNEADEVAYIPCWGRFKLKFPWSRK--------------------------- 224
           T   LSS  N  +E   + CWGR KLK PW++K                           
Sbjct: 4   TSSSLSSPRNGREEEGLLSCWGRLKLKLPWTKKRISSADGCGGSSSVTTRQRRVAGWNIT 63

Query: 223 --------QRKPRGGFNYDPLSYAQNFDEGCWDEDNNDS-NRRFSSRFAAP 98
                   Q++P GGF YDPLSYAQNFDEGCWD+ N D   R FSSRFA P
Sbjct: 64  SLFMRNDRQQRPAGGFRYDPLSYAQNFDEGCWDDYNEDGIYRGFSSRFALP 114


>ref|XP_003615365.1| hypothetical protein MTR_5g067050 [Medicago truncatula]
           gi|355516700|gb|AES98323.1| hypothetical protein
           MTR_5g067050 [Medicago truncatula]
          Length = 80

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
 Frame = -2

Query: 316 MEKLSSLNEADEVAYIPCWGRFKLKFPWSRKQR---KPRGGFNYDPLSYAQNFDEGCWDE 146
           MEK SS      +  + CWG FKLK PW++++    K  GGF YDPLSY+QNFDEG   E
Sbjct: 1   MEKNSS---PPRIFTLSCWGCFKLKLPWTKRKNTCNKSTGGFGYDPLSYSQNFDEGLM-E 56

Query: 145 DNNDSNRRFSSRFAAP 98
           D+ +S RRFS+R+AAP
Sbjct: 57  DDEESCRRFSARYAAP 72


>emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 23/88 (26%)
 Frame = -2

Query: 292 EADEVAYIPCWGRFKLKFPWSRKQR----------------------KPRGGFNYDPLSY 179
           + +E   + CWG  KLKFP ++ +R                      KP   F YDPLSY
Sbjct: 495 DEEEGGLLSCWGNLKLKFPCNKGRRNTQTRHRRVGWKIMEAFKPKRPKPFSSFRYDPLSY 554

Query: 178 AQNFDEGCWDED-NNDSNRRFSSRFAAP 98
           AQNFD+GCWDED    SNR FS+RFA P
Sbjct: 555 AQNFDDGCWDEDCEGSSNRGFSARFAVP 582


>ref|XP_003603706.1| hypothetical protein MTR_3g111360 [Medicago truncatula]
           gi|355492754|gb|AES73957.1| hypothetical protein
           MTR_3g111360 [Medicago truncatula]
          Length = 81

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -2

Query: 271 IPCWGRFKLKFPWSRKQRKPRGGFNYDPLSYAQNFDEGCWDEDNNDS-NRRFSSRFAAPY 95
           + C+GR KLK PW   +R+  GGF YDPLSYAQNFD+G W+ED+ ++  R FS+R+AA  
Sbjct: 19  LSCFGRLKLKLPW---KRRTVGGFRYDPLSYAQNFDDGSWEEDDEEALGRGFSARYAASS 75

Query: 94  PKPVE 80
            K ++
Sbjct: 76  AKTLK 80


>ref|XP_002302358.1| predicted protein [Populus trichocarpa] gi|222844084|gb|EEE81631.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 35/114 (30%)
 Frame = -2

Query: 316 MEKLSSLNEADEVAYIPCWGRFK-LKFPWSRKQ--------------------------- 221
           ME+  S    +E   + CWGR K LKFPW++++                           
Sbjct: 1   MERTLSPRNIEEEGPLSCWGRLKYLKFPWTKRRITSNTTTSPGQKRSAIGCNLTATLTRN 60

Query: 220 -RKPR----GGFNYDPLSYAQNFDEGCWDEDNNDSNR--RFSSRFAAPYPKPVE 80
            RKP+    G F Y PLSYAQNFD+G WD D+ +      FSSRFA P  + +E
Sbjct: 61  NRKPKVPAGGRFRYSPLSYAQNFDDGSWDNDDIEDGEYLGFSSRFAPPPSRSLE 114


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