BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027281
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   154   9e-36
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   140   8e-32
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28

>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/155 (56%), Positives = 112/155 (72%)
 Frame = -1

Query: 465 LYSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNI 286
           +YSA G ++ A KVF+ M   KD++ WNSML AYAS GQMDNA  LF++MP+KD  SFNI
Sbjct: 98  MYSAFGAIDHATKVFEEM-GVKDVVVWNSMLAAYASCGQMDNAMKLFDNMPLKDLASFNI 156

Query: 285 LISGYANIGSMESARHFFDQMAIGGDAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVS 106
           +ISGYA IG   +AR  FD++    D VSWNSMILA   VG+MG AR LFD MP +NV++
Sbjct: 157 MISGYAKIGKKAAARSIFDRIH-AKDIVSWNSMILACTNVGDMGNARNLFDVMPKKNVIT 215

Query: 105 WNTMLCGYLQMGFYSDVIDLFNETKTGELKANHIT 1
           WNTM+ GYL    Y++ +DLF+E K G  +A+H+T
Sbjct: 216 WNTMISGYLHAQLYAEAVDLFDEMKAGNHEADHLT 250



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
 Frame = -1

Query: 462 YSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNIL 283
           Y+ +G    A  +F  + + KD+++WNSM+ A  + G M NA NLF+ MP K+ +++N +
Sbjct: 161 YAKIGKKAAARSIFDRIHA-KDIVSWNSMILACTNVGDMGNARNLFDVMPKKNVITWNTM 219

Query: 282 ISGYANIGSMESARHFFDQMAIGGDA---------------VSW---------------- 196
           ISGY +      A   FD+M  G                  + W                
Sbjct: 220 ISGYLHAQLYAEAVDLFDEMKAGNHEADHLTVTLVLSACAHLGWLGKGTEMHVYAQDHRL 279

Query: 195 -------NSMILAYAKVGEMGRARELFDKMPDRNVVSWNTMLCGYLQMGFYSDVIDLFNE 37
                   S+I  YAK G + R+ E+F K   +++  WN ++ G    G+    + L ++
Sbjct: 280 ASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAIISGLALHGYGHAAVKLLDK 339

Query: 36  TKTGELKANHIT 1
            +   ++ + IT
Sbjct: 340 MRDNGVRPDEIT 351


>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/155 (53%), Positives = 113/155 (72%)
 Frame = -1

Query: 465 LYSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNI 286
           +Y +   V DACKVF+ M   KD++AWNS+LDAYAS+ QMD+A  +FNSMP+KD  SFNI
Sbjct: 94  MYRSHSCVADACKVFEKMPV-KDVVAWNSILDAYASTDQMDDALKVFNSMPLKDLSSFNI 152

Query: 285 LISGYANIGSMESARHFFDQMAIGGDAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVS 106
           +ISGY++IG   SAR  FD MA   D VSWNSMI AY +  +M RA +LF +MP +N+++
Sbjct: 153 MISGYSSIGKTLSARSIFDNMA-EKDIVSWNSMISAYIQGEDMERACDLFREMPAKNIIT 211

Query: 105 WNTMLCGYLQMGFYSDVIDLFNETKTGELKANHIT 1
           WNTM+ G+LQ   Y++V+DLF+E KT     +++T
Sbjct: 212 WNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLT 246



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 38/192 (19%)
 Frame = -1

Query: 462 YSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNIL 283
           YS++G    A  +F +M + KD+++WNSM+ AY     M+ A +LF  MP K+ +++N +
Sbjct: 157 YSSIGKTLSARSIFDNM-AEKDIVSWNSMISAYIQGEDMERACDLFREMPAKNIITWNTM 215

Query: 282 ISGYANIGSMESARHFFDQM----------------------------------AIGGDA 205
           + G+            FD+M                                  AI    
Sbjct: 216 VKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVLSACAHSGSLKKGTEVHIYAIDNGL 275

Query: 204 VS----WNSMILAYAKVGEMGRARELFDKMPDRNVVSWNTMLCGYLQMGFYSDVIDLFNE 37
            S      ++I  YAK G + +  ++F K   +++  WN ++ G    G     +++FN+
Sbjct: 276 ASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIYCWNALISGLALHGHGYAALNIFNK 335

Query: 36  TKTGELKANHIT 1
            +    + + IT
Sbjct: 336 MRKNHTRPDDIT 347


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  154 bits (388), Expect = 9e-36
 Identities = 83/155 (53%), Positives = 104/155 (67%)
 Frame = -1

Query: 465 LYSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNI 286
           +Y  L  + DA KVF+ M   KDLIAWNSMLDAYAS+ QMD A+NLFNSMP+KD  SFNI
Sbjct: 94  MYGNLHCIGDAFKVFEIMPV-KDLIAWNSMLDAYASNAQMDYASNLFNSMPLKDISSFNI 152

Query: 285 LISGYANIGSMESARHFFDQMAIGGDAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVS 106
           +ISGY+  G    AR  FD M +  D VSWNSMI AY + G+M +   LF +MP +N V+
Sbjct: 153 MISGYSTRGEAMLARSIFDSMEV-RDFVSWNSMISAYIRAGDMEKGLALFREMPVKNTVT 211

Query: 105 WNTMLCGYLQMGFYSDVIDLFNETKTGELKANHIT 1
           WNTM+ G LQ   +  V+DLF E KT     +++T
Sbjct: 212 WNTMITGCLQSEHFGMVLDLFEEMKTANYIPDYLT 246



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 38/191 (19%)
 Frame = -1

Query: 462 YSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNIL 283
           YS  G    A  +F  M  R D ++WNSM+ AY  +G M+    LF  MP+K+ V++N +
Sbjct: 157 YSTRGEAMLARSIFDSMEVR-DFVSWNSMISAYIRAGDMEKGLALFREMPVKNTVTWNTM 215

Query: 282 ISGYANIGSMESARHFFDQM----------------------------------AIGGDA 205
           I+G             F++M                                  AI    
Sbjct: 216 ITGCLQSEHFGMVLDLFEEMKTANYIPDYLTVTSVLSTCGHLGSLGTGIKIHIYAIDNGL 275

Query: 204 VS----WNSMILAYAKVGEMGRARELFDKMPDRNVVSWNTMLCGYLQMGFYSDVIDLFNE 37
           VS      ++I  Y+K G + +   +F K   +++  WN ++      G     + +F  
Sbjct: 276 VSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVKDIYCWNALISALALHGHGYAALKVF-- 333

Query: 36  TKTGELKANHI 4
              G+++ NHI
Sbjct: 334 ---GKMRKNHI 341


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  140 bits (354), Expect = 8e-32
 Identities = 78/155 (50%), Positives = 97/155 (62%)
 Frame = -1

Query: 465  LYSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNI 286
            +Y A G ++ A KVF+ M   KD++ WNSML AYAS GQMDNA  LF++MP+KD  SFNI
Sbjct: 902  MYXAFGAIDHATKVFEEM-GVKDVVVWNSMLAAYASXGQMDNAMKLFDNMPLKDLASFNI 960

Query: 285  LISGYANIGSMESARHFFDQMAIGGDAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVS 106
            +ISGYA IG   +AR  FD++    D VSWNSMILA   VG+MG AR LFD MP +N V 
Sbjct: 961  MISGYAKIGRKAAARSIFDRIH-AKDIVSWNSMILACTNVGDMGNARNLFDVMPKKNAV- 1018

Query: 105  WNTMLCGYLQMGFYSDVIDLFNETKTGELKANHIT 1
                              DLF+E K G  +A+H+T
Sbjct: 1019 ------------------DLFDEMKAGNHEADHLT 1035


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/155 (40%), Positives = 98/155 (63%)
 Frame = -1

Query: 465 LYSALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNI 286
           +YS  G +E   KVF  M   KD+++WNS++D YA  G+++ A  +F  MP KD  S+ I
Sbjct: 158 MYSKCGEIELCRKVFDRMED-KDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTI 216

Query: 285 LISGYANIGSMESARHFFDQMAIGGDAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVS 106
           LI G +  G +E+AR  FD+M I  ++VSWN+MI  Y K G+   A+ELFD+MP+R++V+
Sbjct: 217 LIDGLSKSGKLEAARDVFDRMPI-RNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVT 275

Query: 105 WNTMLCGYLQMGFYSDVIDLFNETKTGELKANHIT 1
           WN+M+ GY +   ++  + LF      ++  N+ T
Sbjct: 276 WNSMITGYERNKQFTKALKLFEVMLREDISPNYTT 310



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/126 (26%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
 Frame = -1

Query: 396 LIAWNSMLDAYASSGQMDNAANLFNSMP---IKDHVSFNILISGYANIGSMESARHFFD- 229
           L++WN ++  Y  + + ++A  LF  +    + D  +   ++ G A +G+++  +     
Sbjct: 80  LVSWNLLIKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGL 139

Query: 228 --QMAIGGDAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVSWNTMLCGYLQMGFYSDV 55
             ++  G D    +S++  Y+K GE+   R++FD+M D++VVSWN+++ GY + G     
Sbjct: 140 VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199

Query: 54  IDLFNE 37
           +++F E
Sbjct: 200 LEMFEE 205



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 38/191 (19%)
 Frame = -1

Query: 459 SALGHVEDACKVFKHMTSRKDLIAWNSMLDAYASSGQMDNAANLFNSMPIKDHVSFNILI 280
           S  G +E A  VF  M  R   ++WN+M++ Y  +G  + A  LF+ MP +  V++N +I
Sbjct: 222 SKSGKLEAARDVFDRMPIRNS-VSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMI 280

Query: 279 SGYANIGSMESARHFFDQM-----------------AIGG-------------------- 211
           +GY        A   F+ M                 A  G                    
Sbjct: 281 TGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFK 340

Query: 210 -DAVSWNSMILAYAKVGEMGRARELFDKMPDRNVVSWNTMLCGYLQMGFYSDVIDLFNET 34
            D V    +I  Y+K G +  A  +F  +P + +  W +++ G    G     ++LF+E 
Sbjct: 341 TDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEM 400

Query: 33  KTGELKANHIT 1
               LK + IT
Sbjct: 401 CRTGLKPHAIT 411