BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027272
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]        127   7e-28
ref|NP_188886.1| pentatricopeptide repeat-containing protein [Ar...   127   7e-28
ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat...   124   1e-26
ref|XP_002526170.1| pentatricopeptide repeat-containing protein,...   123   1e-26

>dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/138 (39%), Positives = 92/138 (66%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           G++ AA+ELF  M   G  P ++TY +L+DGL  NG  ++A+E+F  ++ + +   + IY
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           NI+I  +C A K+D+A  +FCSL  KG++PD + YN M+    ++G  ++A  LF +M++
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 369 KGIDPDDYTFNLLVQAFL 422
            G  PDD+T+N+L++A L
Sbjct: 583 DGCTPDDFTYNILIRAHL 600



 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/141 (36%), Positives = 85/141 (60%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G+++ A+EL+N M   G +PD ITY  LIDG     C  EA ++F ++ + G + ++ 
Sbjct: 356 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y+ILI + CKA ++D+   +F  + +KGL P+TI YNT++  F + G  N A+ LF EM
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475

Query: 363 EQKGIDPDDYTFNLLVQAFLE 425
             +G+ P   T+ +L+    +
Sbjct: 476 VSRGVPPSVVTYGILLDGLCD 496



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/139 (31%), Positives = 78/139 (56%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G    A +LF  M+       ++ Y+++ID L  +G F +A+ LF+ +E  G+KA+V 
Sbjct: 251 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 310

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y+ LI  +C  GK D+   +   +  + + PD + ++ +++ F +EG   +A+ L+ EM
Sbjct: 311 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370

Query: 363 EQKGIDPDDYTFNLLVQAF 419
             +GI PD  T+N L+  F
Sbjct: 371 ITRGIAPDTITYNSLIDGF 389



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/139 (31%), Positives = 80/139 (57%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           GRV  A  L + M  +G  PD +TY  +++ L  +G  + A++LF  +E   +KA+V  Y
Sbjct: 218 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 277

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           +I+I+++CK G  D+A  +F  +  KG++ D + Y++++     +G  +D   +  EM  
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 337

Query: 369 KGIDPDDYTFNLLVQAFLE 425
           + I PD  TF+ L+  F++
Sbjct: 338 RNIIPDVVTFSALIDVFVK 356



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/139 (31%), Positives = 81/139 (58%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G    A  LFN M++ G   D++TY+ LI GL  +G + +  ++   +    +  +V 
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 345

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            ++ LI+   K GK+ EAK ++  + T+G+ PDTI YN++++ F +E   ++A  +F  M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 363 EQKGIDPDDYTFNLLVQAF 419
             KG +PD  T+++L+ ++
Sbjct: 406 VSKGCEPDIVTYSILINSY 424



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/120 (32%), Positives = 67/120 (55%)
 Frame = +3

Query: 66  PDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICKAGKIDEAKVI 245
           PD++T++ LID     G   EA EL++ +   G+  +   YN LI+  CK   + EA  +
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 246 FCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYTFNLLVQAFLE 425
           F  + +KG +PD + Y+ ++N++ +    +D   LF E+  KG+ P+  T+N LV  F +
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/134 (29%), Positives = 72/134 (53%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           GRV  A  L + M    + PD++T + LI+GL   G  SEA+ L   +   G + +   Y
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
             ++  +CK+G    A  +F  +  + ++   + Y+ ++++  ++G  +DA +LF EME 
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302

Query: 369 KGIDPDDYTFNLLV 410
           KGI  D  T++ L+
Sbjct: 303 KGIKADVVTYSSLI 316



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/129 (27%), Positives = 68/129 (52%)
 Frame = +3

Query: 24  AQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIE 203
           A ++F+ M   G  PDI+TY++LI+         + M LF  + + GL  N   YN L+ 
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 457

Query: 204 NICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDP 383
             C++GK++ AK +F  + ++G+ P  + Y  +++     G  N A  +F +M++  +  
Sbjct: 458 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 517

Query: 384 DDYTFNLLV 410
               +N+++
Sbjct: 518 GIGIYNIII 526



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/120 (26%), Positives = 61/120 (50%)
 Frame = +3

Query: 57  GKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICKAGKIDEA 236
           G  PD IT++ L++G    G  SEA+ L   +     + ++   + LI  +C  G++ EA
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 237 KVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYTFNLLVQA 416
            V+   +   G QPD + Y  ++N   + G    A +LF +ME++ I      +++++ +
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283


>ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
           gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis
           thaliana] gi|51968798|dbj|BAD43091.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332643122|gb|AEE76643.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/138 (39%), Positives = 92/138 (66%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           G++ AA+ELF  M   G  P ++TY +L+DGL  NG  ++A+E+F  ++ + +   + IY
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           NI+I  +C A K+D+A  +FCSL  KG++PD + YN M+    ++G  ++A  LF +M++
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 369 KGIDPDDYTFNLLVQAFL 422
            G  PDD+T+N+L++A L
Sbjct: 554 DGCTPDDFTYNILIRAHL 571



 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/141 (36%), Positives = 85/141 (60%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G+++ A+EL+N M   G +PD ITY  LIDG     C  EA ++F ++ + G + ++ 
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y+ILI + CKA ++D+   +F  + +KGL P+TI YNT++  F + G  N A+ LF EM
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446

Query: 363 EQKGIDPDDYTFNLLVQAFLE 425
             +G+ P   T+ +L+    +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCD 467



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/139 (31%), Positives = 78/139 (56%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G    A +LF  M+       ++ Y+++ID L  +G F +A+ LF+ +E  G+KA+V 
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y+ LI  +C  GK D+   +   +  + + PD + ++ +++ F +EG   +A+ L+ EM
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341

Query: 363 EQKGIDPDDYTFNLLVQAF 419
             +GI PD  T+N L+  F
Sbjct: 342 ITRGIAPDTITYNSLIDGF 360



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/139 (31%), Positives = 80/139 (57%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           GRV  A  L + M  +G  PD +TY  +++ L  +G  + A++LF  +E   +KA+V  Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           +I+I+++CK G  D+A  +F  +  KG++ D + Y++++     +G  +D   +  EM  
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308

Query: 369 KGIDPDDYTFNLLVQAFLE 425
           + I PD  TF+ L+  F++
Sbjct: 309 RNIIPDVVTFSALIDVFVK 327



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/139 (31%), Positives = 81/139 (58%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G    A  LFN M++ G   D++TY+ LI GL  +G + +  ++   +    +  +V 
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            ++ LI+   K GK+ EAK ++  + T+G+ PDTI YN++++ F +E   ++A  +F  M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 363 EQKGIDPDDYTFNLLVQAF 419
             KG +PD  T+++L+ ++
Sbjct: 377 VSKGCEPDIVTYSILINSY 395



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/120 (32%), Positives = 67/120 (55%)
 Frame = +3

Query: 66  PDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICKAGKIDEAKVI 245
           PD++T++ LID     G   EA EL++ +   G+  +   YN LI+  CK   + EA  +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 246 FCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYTFNLLVQAFLE 425
           F  + +KG +PD + Y+ ++N++ +    +D   LF E+  KG+ P+  T+N LV  F +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/134 (29%), Positives = 72/134 (53%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           GRV  A  L + M    + PD++T + LI+GL   G  SEA+ L   +   G + +   Y
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
             ++  +CK+G    A  +F  +  + ++   + Y+ ++++  ++G  +DA +LF EME 
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 369 KGIDPDDYTFNLLV 410
           KGI  D  T++ L+
Sbjct: 274 KGIKADVVTYSSLI 287



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/129 (27%), Positives = 68/129 (52%)
 Frame = +3

Query: 24  AQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIE 203
           A ++F+ M   G  PDI+TY++LI+         + M LF  + + GL  N   YN L+ 
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428

Query: 204 NICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDP 383
             C++GK++ AK +F  + ++G+ P  + Y  +++     G  N A  +F +M++  +  
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488

Query: 384 DDYTFNLLV 410
               +N+++
Sbjct: 489 GIGIYNIII 497



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/120 (26%), Positives = 61/120 (50%)
 Frame = +3

Query: 57  GKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICKAGKIDEA 236
           G  PD IT++ L++G    G  SEA+ L   +     + ++   + LI  +C  G++ EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194

Query: 237 KVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYTFNLLVQA 416
            V+   +   G QPD + Y  ++N   + G    A +LF +ME++ I      +++++ +
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254


>ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|222861734|gb|EEE99276.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/141 (40%), Positives = 92/141 (65%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           + GR +AAQ+LF ++  HG +P+I+TY VL+DGL  +G   EA  LF  ++ + +K N+ 
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
           IY ILI+++CK GKI + K +F  L  +GL+P+   Y  ++ A  +EG+  +A  LF +M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 363 EQKGIDPDDYTFNLLVQAFLE 425
           E+ G  PD   +N+++Q FL+
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQ 424



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/134 (31%), Positives = 72/134 (53%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           G++     L++ M V G  P++ TY V+I+ L  +G  +EA+     +E  G   NV  Y
Sbjct: 146 GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNY 205

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           + LI+  C  G++DEA+ +F  + +KG  P+   Y ++MN + +     +A  L  E  +
Sbjct: 206 STLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR 265

Query: 369 KGIDPDDYTFNLLV 410
           KG+ PD  TF  ++
Sbjct: 266 KGLVPDIVTFTTII 279



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/135 (34%), Positives = 65/135 (48%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G +  A  LF  MQ     P+++ Y +LID L   G   +  ELF  + + GLK NV 
Sbjct: 319 KHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVY 378

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y  L+  +CK G I EA  +F  +   G  PD   YN ++  F +   P+ A+ L  EM
Sbjct: 379 TYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438

Query: 363 EQKGIDPDDYTFNLL 407
             +G   D  T  LL
Sbjct: 439 VNRGFSADAATRALL 453



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/121 (29%), Positives = 67/121 (55%)
 Frame = +3

Query: 57  GKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICKAGKIDEA 236
           G  P I+T+  L++GL   G   + M L+  +   GL+ NV  YN++I ++ K+GK +EA
Sbjct: 127 GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEA 186

Query: 237 KVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYTFNLLVQA 416
                 +   G  P+ + Y+T+++ +   G  ++A+++F  M  KG  P+ YT+  L+  
Sbjct: 187 LGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNG 246

Query: 417 F 419
           +
Sbjct: 247 Y 247



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/136 (30%), Positives = 66/136 (48%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G+   A      M+  G  P+++ Y+ LIDG    G   EA  +F ++ + G   NV 
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y  L+   CK  +I+EA  +      KGL PD + + T+++   R G P  AQ LF  +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 363 EQKGIDPDDYTFNLLV 410
              G  P+  T+ +L+
Sbjct: 299 CAHGHTPNIMTYGVLL 314



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/136 (23%), Positives = 69/136 (50%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           G++  A+ +F+ M   G +P++ TY  L++G        EA++L       GL  ++  +
Sbjct: 216 GQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTF 275

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
             +I  +C+AG+   A+ +F  +   G  P+ + Y  +++   + G   +A  LF EM++
Sbjct: 276 TTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR 335

Query: 369 KGIDPDDYTFNLLVQA 416
             + P+   + +L+ +
Sbjct: 336 STVKPNLVIYTILIDS 351



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/127 (22%), Positives = 61/127 (48%)
 Frame = +3

Query: 36  FNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICK 215
           F  M +    P I+ ++ L   +   G +   + L   +E  G++ ++   +ILI   C 
Sbjct: 50  FRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCH 109

Query: 216 AGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYT 395
             ++D    +   +   GL+P  + + T++N    EG  +    L+ +M  +G+ P+ YT
Sbjct: 110 LHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYT 169

Query: 396 FNLLVQA 416
           +N+++ +
Sbjct: 170 YNVIINS 176


>ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/141 (40%), Positives = 95/141 (67%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G+  AA+ELF  M  H + P++ T A+++DGLF     SEA+ LF  +E   L+ NV 
Sbjct: 399 KAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVV 458

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
           IYNI+++ +C  GK+++A+ +F  LP+KG++ D + Y TM+    +EG+ +DA+NL M+M
Sbjct: 459 IYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKM 518

Query: 363 EQKGIDPDDYTFNLLVQAFLE 425
           E+ G  P+++T+N+ V+  L+
Sbjct: 519 EENGCLPNEFTYNVFVRGLLQ 539



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/139 (33%), Positives = 70/139 (50%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G V  A  LF+ M   G  PD++ Y  LI GL   G + EA  L   +   G+  NV 
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQ 283

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            +N+L++N CK G I  AK I   +   G++PD + YN++++         DA  +F  M
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM 343

Query: 363 EQKGIDPDDYTFNLLVQAF 419
             KG  P+  T++ L+  +
Sbjct: 344 IHKGFLPNLVTYSSLIHGW 362



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAI- 185
           G V  A    + ++  G   +  TY  +I+GL   G  S A+     ++      +V I 
Sbjct: 155 GNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIA 214

Query: 186 YNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEME 365
           Y+ +++++CK G + EA  +F  + +KG+QPD + YN++++     G   +A  L   M 
Sbjct: 215 YSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMM 274

Query: 366 QKGIDPDDYTFNLLVQAF 419
           +KGI P+  TFN+LV  F
Sbjct: 275 RKGIMPNVQTFNVLVDNF 292



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/124 (27%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
 Frame = +3

Query: 48  QVHGKSPD---IITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIENICKA 218
           ++ G++ D   +I Y+ ++D L  +G   EA+ LF  + + G++ ++  YN LI  +C  
Sbjct: 201 KIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNF 260

Query: 219 GKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDPDDYTF 398
           G+  EA  +  ++  KG+ P+   +N +++ F ++GM + A+ +   M   G++PD  T+
Sbjct: 261 GRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTY 320

Query: 399 NLLV 410
           N ++
Sbjct: 321 NSVI 324



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/141 (25%), Positives = 68/141 (48%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G +  A+ +   M   G  PD++TY  +I G        +A+++F ++ + G   N+ 
Sbjct: 294 KDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLV 353

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            Y+ LI   CK   I++A  +   +   GL PD + ++T++  F + G P  A+ LF  M
Sbjct: 354 TYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTM 413

Query: 363 EQKGIDPDDYTFNLLVQAFLE 425
            +    P+  T  +++    +
Sbjct: 414 HEHDQHPNLQTCAIILDGLFK 434



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/137 (27%), Positives = 69/137 (50%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           GR   A  L  +M   G  P++ T+ VL+D    +G  S A  +   + + G++ +V  Y
Sbjct: 261 GRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTY 320

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           N +I   C   ++ +A  +F  +  KG  P+ + Y+++++ + +    N A  L  EM  
Sbjct: 321 NSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVN 380

Query: 369 KGIDPDDYTFNLLVQAF 419
            G++PD  T++ L+  F
Sbjct: 381 SGLNPDVVTWSTLIGGF 397



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/129 (27%), Positives = 69/129 (53%)
 Frame = +3

Query: 24  AQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIE 203
           A ++F  M   G  P+++TY+ LI G       ++A+ L   + N+GL  +V  ++ LI 
Sbjct: 336 AVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIG 395

Query: 204 NICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDP 383
             CKAGK + AK +FC++      P+      +++   +    ++A +LF EME+  ++ 
Sbjct: 396 GFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLEL 455

Query: 384 DDYTFNLLV 410
           +   +N+++
Sbjct: 456 NVVIYNIVL 464


>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/139 (41%), Positives = 94/139 (67%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           GR+  A+ELFN+MQ+ G+SP + TY VL+DGL  NGC  EA+++F  +++   K ++ IY
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
           +ILI  + +A + + A  IF  +PT GL P+ + YN M+N   +EG   +A+ LF++ME+
Sbjct: 363 SILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422

Query: 369 KGIDPDDYTFNLLVQAFLE 425
            G + D+ +FN +++ FL+
Sbjct: 423 SGCEQDEISFNFIIRGFLQ 441



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/134 (29%), Positives = 71/134 (52%)
 Frame = +3

Query: 24  AQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIE 203
           A   F+ M   G  PD++T+  LID L   G   EA ++F ++   G   N+  YN L+ 
Sbjct: 168 ATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLN 227

Query: 204 NICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDP 383
            +C   ++D A  +F  +  +G++ D I YNT++N +   G   +A  LF +M+ + + P
Sbjct: 228 GLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTP 287

Query: 384 DDYTFNLLVQAFLE 425
              T+ +L++A  +
Sbjct: 288 SITTYTILLKALYQ 301



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/136 (32%), Positives = 73/136 (53%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G  +   ++F  M   G  P++I Y+ LI+GL   G   EA+ LF  + + G+KANV 
Sbjct: 91  KDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVI 150

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            YN LI   C+ G   EA   F  +  +G+ PD + + T+++   ++G   +A  +F  M
Sbjct: 151 TYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210

Query: 363 EQKGIDPDDYTFNLLV 410
            ++G  P+  T+N L+
Sbjct: 211 IKQGEAPNIVTYNSLL 226



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/136 (31%), Positives = 71/136 (52%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           K G+V  A ++F  M   G++P+I+TY  L++GL  +     A+ LF ++   G+K +V 
Sbjct: 196 KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVI 255

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            YN LI   C +GK +EA  +F  +  + L P    Y  ++ A  + G    A+ LF  M
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315

Query: 363 EQKGIDPDDYTFNLLV 410
           +  G  P   T+ +L+
Sbjct: 316 QICGQSPSLDTYTVLL 331



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/129 (32%), Positives = 73/129 (56%)
 Frame = +3

Query: 24  AQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIE 203
           A EL   M     S +  TY ++ID L  +G   + +++F  + N G+  NV +Y+ LI 
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 204 NICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDP 383
            +C+ GK+ EA  +F  + ++G++ + I YN++++A  R G+  +A   F +M  +GI P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 384 DDYTFNLLV 410
           D  TF  L+
Sbjct: 183 DVVTFTTLI 191



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/136 (31%), Positives = 71/136 (52%)
 Frame = +3

Query: 9   GRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIY 188
           G+V+ A ELF+ M   G   DI+ Y  LI+ L        A+EL   + +     N   Y
Sbjct: 23  GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82

Query: 189 NILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQ 368
            ++I+++CK G   +   +F  +   G+ P+ I+Y++++N   R G   +A NLF EM  
Sbjct: 83  GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS 142

Query: 369 KGIDPDDYTFNLLVQA 416
           +GI  +  T+N L+ A
Sbjct: 143 QGIKANVITYNSLIHA 158



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/139 (29%), Positives = 70/139 (50%)
 Frame = +3

Query: 3   KVGRVVAAQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVA 182
           +VG++  A  LF+ M   G   ++ITY  LI      G + EA   F  +   G+  +V 
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 183 IYNILIENICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEM 362
            +  LI+++ K GK+ EA  IF  +  +G  P+ + YN+++N        + A  LF  M
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 363 EQKGIDPDDYTFNLLVQAF 419
            ++GI  D  ++N L+  +
Sbjct: 246 VERGIKIDVISYNTLINGY 264



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/129 (26%), Positives = 63/129 (48%)
 Frame = +3

Query: 24  AQELFNHMQVHGKSPDIITYAVLIDGLFANGCFSEAMELFHMVENNGLKANVAIYNILIE 203
           A  LF  M   G   D+I+Y  LI+G   +G   EAM LF  ++   L  ++  Y IL++
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 204 NICKAGKIDEAKVIFCSLPTKGLQPDTIMYNTMMNAFRREGMPNDAQNLFMEMEQKGIDP 383
            + + G+I  AK +F ++   G  P    Y  +++   + G   +A ++F  ++     P
Sbjct: 298 ALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKP 357

Query: 384 DDYTFNLLV 410
               +++L+
Sbjct: 358 SIRIYSILI 366