BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027269
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              115   4e-24
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   114   1e-23
gb|AAB82754.1| retrofit [Oryza longistaminata]                        113   2e-23
emb|CCH50966.1| T4.5 [Malus x robusta]                                113   2e-23
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   113   2e-23

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  115 bits (289), Expect = 4e-24
 Identities = 46/83 (55%), Positives = 66/83 (79%)
 Frame = +3

Query: 6   ISYLSPHEKLFNTSPDYTFFKTYGCLCFPWLKPYTNSKLQARTKPCVFIGYSPKHRGYKC 185
           ++Y SP+E+LF+  P Y   K +GC CFP+L+PY +SKLQ R+K CVF+GYS  H+GY+C
Sbjct: 604 LNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSLNHQGYRC 663

Query: 186 LELQSGRIFISRHVVFDETTFPF 254
            +  SGR+++SRHV+FDE++FPF
Sbjct: 664 FDPSSGRVYLSRHVLFDESSFPF 686


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/108 (47%), Positives = 69/108 (63%)
 Frame = +3

Query: 6   ISYLSPHEKLFNTSPDYTFFKTYGCLCFPWLKPYTNSKLQARTKPCVFIGYSPKHRGYKC 185
           + + SP E LF   P+Y   + +GCLCFPW++PY++ KL  R+KPCVF+GYS  H  YKC
Sbjct: 655 LKHQSPFESLFQHMPNYDKLRAFGCLCFPWMRPYSDHKLDKRSKPCVFLGYSNTHNAYKC 714

Query: 186 LELQSGRIFISRHVVFDETTFPFHTHTHRECTNTPLSSHLPTSSFPSC 329
           L+L S R++ISRHV F E  FPF ++T      TP       S++ SC
Sbjct: 715 LDLSSNRVYISRHVQFIEHKFPFASNT------TPTDLBQAISTWSSC 756


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  113 bits (282), Expect = 2e-23
 Identities = 48/86 (55%), Positives = 63/86 (73%)
 Frame = +3

Query: 3   TISYLSPHEKLFNTSPDYTFFKTYGCLCFPWLKPYTNSKLQARTKPCVFIGYSPKHRGYK 182
           TI   +P EKLFN  PDY+  + +GC C+P L+PY   KLQ R+K CVF+G+S  H+G+K
Sbjct: 659 TIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFK 718

Query: 183 CLELQSGRIFISRHVVFDETTFPFHT 260
           CL++ SGR++ISR VVFDE  FPF T
Sbjct: 719 CLDVSSGRVYISRDVVFDENVFPFST 744


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 23/153 (15%)
 Frame = +3

Query: 9    SYLSPHEKLFNTSPDYTFFKTYGCLCFPWLKPYTNSKLQARTKPCVFIGYSPKHRGYKCL 188
            S +SP E LF+ SP Y   K +GC C+PWL+PY+  KL  ++K CVF+GYS  H GY+C 
Sbjct: 937  SVISPWELLFHASPKYHTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCW 996

Query: 189  ELQSGRIFISRHVVFDETTFPFHTHT-----HRECTNTPLS-----------SHLPTSSF 320
            +  S R++ISRHVVFDE+ FP+ + +     H  C ++PL            SHL   S 
Sbjct: 997  DPISNRLYISRHVVFDESLFPYKSLSSQASHHSPCVSSPLHPPMSLHLPLPVSHLEQQSS 1056

Query: 321  PSCIL------PLTIRLTYTHSPV-SATSNTIH 398
            P+  L      P +I  T  H+ + S+   ++H
Sbjct: 1057 PAAALEGRNASPPSIFSTAAHTTIPSSAQESLH 1089


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
 Frame = +3

Query: 6   ISYLSPHEKLFNTSPDYTFFKTYGCLCFPWLKPYTNSKLQARTKPCVFIGYSPKHRGYKC 185
           ++Y SP + LF  SP+Y  FK +GCLC+P+++PY  +KL  R+  CVF+GYS  H+GY C
Sbjct: 532 LNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMC 591

Query: 186 LELQSGRIFISRHVVFDETTFPFHTHTHRECT--NTPLSSHLPTSSFP-----SCILPLT 344
           L   +GR++++RHVVF ET FPF +   +  +    P  + LP SS P     S   P T
Sbjct: 592 LNPLTGRLYVTRHVVFHETVFPFQSTPDQSSSVVTIPTPAFLPCSSPPVSSLRSHTTPST 651

Query: 345 IRLTYTHSPVSATS 386
                T+ P S  S
Sbjct: 652 SSPPLTNMPSSTIS 665