BLASTX nr result

ID: Cimicifuga21_contig00027260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027260
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20222.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002282960.1| PREDICTED: uncharacterized protein LOC100241...    59   3e-07
ref|XP_002451861.1| hypothetical protein SORBIDRAFT_04g008850 [S...    59   5e-07
gb|AAF69532.1|AC008007_7 F12M16.12 [Arabidopsis thaliana]              58   7e-07
dbj|BAD43479.1| unknown protein [Arabidopsis thaliana] gi|519701...    58   7e-07

>emb|CBI20222.3| unnamed protein product [Vitis vinifera]
          Length = 661

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = +3

Query: 3   NNITGVSTFLIIFYVRGLXXXXXXXXXXXXXXXXXMGLFTSVYKTLPRWTYFIAYLLYPV 182
           NN+ G+S  L I YVR L                 MG+F S+  T P WT  +AYLLYP+
Sbjct: 587 NNVLGISVLLSIIYVRELTWDFSAEVLVVMIVCVVMGMFASLRSTFPVWTSIVAYLLYPL 646

Query: 183 SLVLIYFLR*DDGY 224
           SL+L+Y L   DG+
Sbjct: 647 SLLLVYAL---DGF 657


>ref|XP_002282960.1| PREDICTED: uncharacterized protein LOC100241883 [Vitis vinifera]
          Length = 695

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = +3

Query: 3   NNITGVSTFLIIFYVRGLXXXXXXXXXXXXXXXXXMGLFTSVYKTLPRWTYFIAYLLYPV 182
           NN+ G+S  L I YVR L                 MG+F S+  T P WT  +AYLLYP+
Sbjct: 621 NNVLGISVLLSIIYVRELTWDFSAEVLVVMIVCVVMGMFASLRSTFPVWTSIVAYLLYPL 680

Query: 183 SLVLIYFLR*DDGY 224
           SL+L+Y L   DG+
Sbjct: 681 SLLLVYAL---DGF 691


>ref|XP_002451861.1| hypothetical protein SORBIDRAFT_04g008850 [Sorghum bicolor]
           gi|241931692|gb|EES04837.1| hypothetical protein
           SORBIDRAFT_04g008850 [Sorghum bicolor]
          Length = 562

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/68 (44%), Positives = 37/68 (54%)
 Frame = +3

Query: 3   NNITGVSTFLIIFYVRGLXXXXXXXXXXXXXXXXXMGLFTSVYKTLPRWTYFIAYLLYPV 182
           NN   ++ FL + YVRGL                 MGLFTS     P WT F+AYLLYP+
Sbjct: 488 NNTLCLAVFLGLVYVRGLTWDFSSEVLIIFLVCTIMGLFTSFRTNFPLWTCFVAYLLYPL 547

Query: 183 SLVLIYFL 206
           SLV++Y L
Sbjct: 548 SLVIVYVL 555


>gb|AAF69532.1|AC008007_7 F12M16.12 [Arabidopsis thaliana]
          Length = 574

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/68 (48%), Positives = 35/68 (51%)
 Frame = +3

Query: 3   NNITGVSTFLIIFYVRGLXXXXXXXXXXXXXXXXXMGLFTSVYKTLPRWTYFIAYLLYPV 182
           NNI  +S FL I YVRGL                 MG F S   T P WT FIAYLLYP 
Sbjct: 500 NNILCLSVFLAIVYVRGLTWNFSSEVLVILIVCLVMGGFASFRTTYPLWTCFIAYLLYPF 559

Query: 183 SLVLIYFL 206
           SL L+Y L
Sbjct: 560 SLGLVYIL 567


>dbj|BAD43479.1| unknown protein [Arabidopsis thaliana] gi|51970100|dbj|BAD43742.1|
           unknown protein [Arabidopsis thaliana]
           gi|51970434|dbj|BAD43909.1| unknown protein [Arabidopsis
           thaliana]
          Length = 148

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/68 (48%), Positives = 35/68 (51%)
 Frame = +3

Query: 3   NNITGVSTFLIIFYVRGLXXXXXXXXXXXXXXXXXMGLFTSVYKTLPRWTYFIAYLLYPV 182
           NNI  +S FL I YVRGL                 MG F S   T P WT FIAYLLYP 
Sbjct: 74  NNILCLSVFLAIVYVRGLTWNFSSEVLVILIVCLVMGGFASFRTTYPLWTCFIAYLLYPF 133

Query: 183 SLVLIYFL 206
           SL L+Y L
Sbjct: 134 SLGLVYIL 141


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