BLASTX nr result

ID: Cimicifuga21_contig00027242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027242
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318338.1| argonaute protein group [Populus trichocarpa...   111   5e-23
ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...   110   1e-22
gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]                108   5e-22
dbj|BAJ09698.1| ARGONAUTE 1 [Nicotiana tabacum]                       107   1e-21
gb|ABC61503.1| AGO1-2, partial [Nicotiana benthamiana]                105   3e-21

>ref|XP_002318338.1| argonaute protein group [Populus trichocarpa]
           gi|222859011|gb|EEE96558.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1062

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/72 (72%), Positives = 64/72 (88%)
 Frame = +2

Query: 143 ATTQPLRLPLRPGKGSTGIKCIVKANHFFAELLLPDKDVHHYDVTIIPQVTSRSVNRVIM 322
           A+++ +R PLRPGKGSTGI+CIVKANHFFAEL  PDKD+H YDVTI P+VTSR VNR +M
Sbjct: 183 ASSKSVRFPLRPGKGSTGIRCIVKANHFFAEL--PDKDLHQYDVTITPEVTSRGVNRAVM 240

Query: 323 KKLVQLYKESHL 358
           ++LV+LY+ESHL
Sbjct: 241 EQLVKLYRESHL 252


>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223534406|gb|EEF36112.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 1063

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/71 (71%), Positives = 63/71 (88%)
 Frame = +2

Query: 146 TTQPLRLPLRPGKGSTGIKCIVKANHFFAELLLPDKDVHHYDVTIIPQVTSRSVNRVIMK 325
           +++ +R PLRPGKGSTGI+CIVKANHFFAEL  PDKD+H YDVTI P+VTSR VNR +M+
Sbjct: 184 SSKSMRFPLRPGKGSTGIRCIVKANHFFAEL--PDKDLHQYDVTITPEVTSRGVNRAVME 241

Query: 326 KLVQLYKESHL 358
           +LV+LY+ESHL
Sbjct: 242 QLVKLYRESHL 252


>gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]
          Length = 1052

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/72 (69%), Positives = 63/72 (87%)
 Frame = +2

Query: 143 ATTQPLRLPLRPGKGSTGIKCIVKANHFFAELLLPDKDVHHYDVTIIPQVTSRSVNRVIM 322
           A+++ +R PLRPGKGSTGI+CIVKANHFFAEL  PDKD+H YDV+I P+V SR VNR +M
Sbjct: 173 ASSKSMRFPLRPGKGSTGIRCIVKANHFFAEL--PDKDLHQYDVSITPEVASRGVNRAVM 230

Query: 323 KKLVQLYKESHL 358
           ++LV+LY+ESHL
Sbjct: 231 EQLVKLYRESHL 242


>dbj|BAJ09698.1| ARGONAUTE 1 [Nicotiana tabacum]
          Length = 1061

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/72 (69%), Positives = 63/72 (87%)
 Frame = +2

Query: 143 ATTQPLRLPLRPGKGSTGIKCIVKANHFFAELLLPDKDVHHYDVTIIPQVTSRSVNRVIM 322
           A+++ +R PLRPGKGSTGI+CIVKANHFFAEL  PDKD+H YDV+I P V+SR VNR +M
Sbjct: 180 ASSKSMRFPLRPGKGSTGIRCIVKANHFFAEL--PDKDLHQYDVSITPVVSSRGVNRAVM 237

Query: 323 KKLVQLYKESHL 358
           ++LV+LY+ESHL
Sbjct: 238 EQLVKLYRESHL 249


>gb|ABC61503.1| AGO1-2, partial [Nicotiana benthamiana]
          Length = 979

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/72 (69%), Positives = 62/72 (86%)
 Frame = +2

Query: 143 ATTQPLRLPLRPGKGSTGIKCIVKANHFFAELLLPDKDVHHYDVTIIPQVTSRSVNRVIM 322
           A+++ LR PLRPGKGS G++CIVKANHFFAEL  PDKD+H YDVTI P+V+SR VNR +M
Sbjct: 99  ASSKLLRFPLRPGKGSNGMRCIVKANHFFAEL--PDKDLHQYDVTISPEVSSRGVNRAVM 156

Query: 323 KKLVQLYKESHL 358
            +LV+LY+ESHL
Sbjct: 157 AQLVKLYQESHL 168


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