BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027239
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   228   2e-57
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   221   3e-55
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   214   3e-53
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   214   4e-53
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   204   4e-50

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  228 bits (582), Expect = 2e-57
 Identities = 140/380 (36%), Positives = 202/380 (53%), Gaps = 11/380 (2%)
 Frame = -3

Query: 1109 SNWSDLPEELTMEIAKKLPNIEDIVRFGATCHSWQNTISN----CGLSLGPKLPWLMLSE 942
            ++WS +P++    IA+KL ++ED VRFG  C SW +   +    C  S   K PWLML+E
Sbjct: 920  ADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSS---KSPWLMLAE 976

Query: 941  KKESENSRTFVSFPTNKIFNLYLPEAQGRQCHGSPHGWLITLGLDLQIHLVNPLSRARIQ 762
            K+ SE  R F S  + K++ + LPE  G+ C GSP+GWL+T+G DL + L+NPL+R +I 
Sbjct: 977  KENSE-IRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQIL 1035

Query: 761  LPPQSTFPH---QYEEGCSPEKLRRVFIRKAIXXXXXXXSTFPEDGIVLAIYSATDKLAF 591
            LP     P+     +      + + +FI KA+            D  V+ IYS   +LAF
Sbjct: 1036 LPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPS----SPDCAVMIIYSDYGRLAF 1091

Query: 590  ARPSDATWNPLGCPQGAHDDILFFRGQFYAVSAMGELRVCDITSSPPVAREFLSPP--RD 417
             +P   TW  L    G  DDI++F G F AV+   E+ +CDI+ S      F + P  +D
Sbjct: 1092 TKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQD 1151

Query: 416  MD--GWARIYLVEMSGDLHMVVRGFEDKEENFLVGRHTNETISFQVYRLDFSTKEWTELK 243
            +D   +   YLVE  G+++MV R   D     +       T +F V +LD   K W E++
Sbjct: 1152 VDEIEYEAKYLVESGGEIYMVTRNLYDTARRDI---PYMRTWTFSVLKLDMCNKRWEEVE 1208

Query: 242  SFDHHALFLGCNSSFSIQVSDYPACKGSCIYFADDARPDGELTYGFDAGVFNLKDQTIGP 63
            + DH + FLG N SFS   SDYP  + + IYF DD      +   FD G++N ++  I  
Sbjct: 1209 NLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNTQI-E 1267

Query: 62   LYADDRNTLSLFSPPLWITP 3
             Y    + LS+FS PLWI P
Sbjct: 1268 HYPVGHDALSMFSAPLWIRP 1287


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  221 bits (563), Expect = 3e-55
 Identities = 146/402 (36%), Positives = 211/402 (52%), Gaps = 31/402 (7%)
 Frame = -3

Query: 1115 MASNWSDLPEELTMEIAKKLPNIEDIVRFGATCHSWQNTISNCGLSLGPKLPWLML--SE 942
            M  +WS LP EL   I+K L    D +   A CH+W+ +I      L P+LPWLML  S+
Sbjct: 1    MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQ 60

Query: 941  KKESENSRTFVSFPTNKIFNLYLPEAQGRQCH-GSPHGWLITLGLDLQIHLVNPLSRARI 765
             + +++ R F S  TNK   L LPE   R+ H GS HGWL+ L     I L+NPL+RA++
Sbjct: 61   SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 764  QLPPQSTFPH----QYEE---------------GCSPEKLRRVFIRKAIXXXXXXXSTFP 642
             LPP S+FP+     Y +                 S  ++R  FIRK +           
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDN-- 178

Query: 641  EDGIVLAIYSATDKLAFARPSDATWNPLGCPQGAHDDILFFRGQFYAVSAMGELRVCDIT 462
             + +V+AI + TD LA+ R  D +W+ +   +   +D++F  G FYAV+  G++ +CDI+
Sbjct: 179  -NFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDIS 237

Query: 461  SSPPVAREFLSPPRDMDGWARIYLVEMSGDLHMVVRGFEDKEENF----LVGRHTNETIS 294
            S  P    F+  PR   G  + YLV  SGD  ++V  + D E  F    +       TI 
Sbjct: 238  SDSPRV-SFMETPRQAGGDMQ-YLVN-SGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR 294

Query: 293  FQVYRLDFSTKEWTELKSFDHHALFLGCNSSFSIQVSDYPACKGSCIYFAD---DARPDG 123
            F+V+RLD++  +W  + +    ALF+G NSS S+  +D+  C G+CIY+ D   DA  DG
Sbjct: 295  FEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDG 354

Query: 122  ELTYGFDAGVFNLKDQTIGPLYADDRNTLS--LFSPPLWITP 3
                  D G+F L D+TI PL    RN  S   +SPPLW++P
Sbjct: 355  HFG-DHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP 395


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  214 bits (546), Expect = 3e-53
 Identities = 144/396 (36%), Positives = 198/396 (50%), Gaps = 27/396 (6%)
 Frame = -3

Query: 1109 SNWSDLPEELTMEIAKKLPNIEDIVRFGATCHSWQNTISNCGLSLGPKLPWLMLSEKKES 930
            ++WS L  EL   IAKK     D VRF A CH+W+ ++      L  +LPWLML + +  
Sbjct: 2    ADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 929  ENSRTFVSFPTNKIFNLYLPEA-QGRQCHGSPHGWLITLGLDLQIHLVNPLSRARIQLPP 753
               R F S   NK   L LPEA   R+  GS HGWL+ L    +I L+NPL+R+++ LPP
Sbjct: 62   HTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPP 121

Query: 752  QSTFPH-----------QYEEGCSP--------EKLRRVFIRKAIXXXXXXXSTFPEDGI 630
             STFP+           +Y    S         +K+R  FI+K I        +   D I
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS---DFI 178

Query: 629  VLAIYSATDKLAFARPSDATWNPLGCPQGAHDDILFFRGQFYAVSAMGELRVCDITSSPP 450
             + I + T  LA  R SD +W  L   Q   +D++F RG FYAV+  G + VCD++ S P
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSP 238

Query: 449  VAREFLSPPRDMDGWARIYLVEMSGDLHMVVRGFE-----DKEENFLVGRHTNETISFQV 285
                 +  P+   G  + YLVE   +L +V R  +     + ++  L+ R    T  FQV
Sbjct: 239  RV-SIIEMPQQFGGDLQ-YLVESGEELLLVTRYLDLTYDVEPDQTSLIYR----TTRFQV 292

Query: 284  YRLDFSTKEWTELKSFDHHALFLGCNSSFSIQVSDYPACKGSCIYFADDARPDGELTYG- 108
             RLD     W  + S    ALFLG N S S+   D+P CKG+CIY+ DD   D     G 
Sbjct: 293  CRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGG 352

Query: 107  -FDAGVFNLKDQTIGPLYADDRNTLSLFSPPLWITP 3
              D G+FNL+D +I PL     +    + PPLW+TP
Sbjct: 353  EQDLGIFNLEDGSIEPLPCS--HFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  214 bits (545), Expect = 4e-53
 Identities = 144/396 (36%), Positives = 198/396 (50%), Gaps = 27/396 (6%)
 Frame = -3

Query: 1109 SNWSDLPEELTMEIAKKLPNIEDIVRFGATCHSWQNTISNCGLSLGPKLPWLMLSEKKES 930
            ++WS L  EL   IAKK     D VRF A CH+W+ ++      L  +LPWLML + +  
Sbjct: 2    ADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 929  ENSRTFVSFPTNKIFNLYLPEA-QGRQCHGSPHGWLITLGLDLQIHLVNPLSRARIQLPP 753
               R F S   NK   L LPEA   R+  GS HGWL+ L    +I L+NPL+R+++ LPP
Sbjct: 62   HTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPP 121

Query: 752  QSTFPH-----------QYEEGCSP--------EKLRRVFIRKAIXXXXXXXSTFPEDGI 630
             STFP+           +Y    S         +K+R  FI+K I        +   D I
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS---DFI 178

Query: 629  VLAIYSATDKLAFARPSDATWNPLGCPQGAHDDILFFRGQFYAVSAMGELRVCDITSSPP 450
             + I + T  LA  R SD +W  L   Q   +D++F RG FYAV+  G + VCD++ S P
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSP 238

Query: 449  VAREFLSPPRDMDGWARIYLVEMSGDLHMVVRGFE-----DKEENFLVGRHTNETISFQV 285
                 +  P+   G  + YLVE   +L +V R  +     + ++  L+ R    T  FQV
Sbjct: 239  RV-SIIEMPQQFGGDLQ-YLVESGEELLLVTRYLDLTYDVEXDQTSLIYR----TTRFQV 292

Query: 284  YRLDFSTKEWTELKSFDHHALFLGCNSSFSIQVSDYPACKGSCIYFADDARPDGELTYG- 108
             RLD     W  + S    ALFLG N S S+   D+P CKG+CIY+ DD   D     G 
Sbjct: 293  CRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGG 352

Query: 107  -FDAGVFNLKDQTIGPLYADDRNTLSLFSPPLWITP 3
              D G+FNL+D +I PL     +    + PPLW+TP
Sbjct: 353  EQDLGIFNLEDGSIEPLPCS--HFRIRWPPPLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  204 bits (519), Expect = 4e-50
 Identities = 134/397 (33%), Positives = 205/397 (51%), Gaps = 26/397 (6%)
 Frame = -3

Query: 1115 MASNWSDLPEELTMEIAKKLPNIEDIVRFGATCHSWQNTISNCGLSLGPKLPWLMLSEKK 936
            MA +W+ LP EL   I+KK+    D + F A CH+W+++I      L P+LPWL+L + +
Sbjct: 1    MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60

Query: 935  ESENS-RTFVSFPTNKIFNLYLPEAQGRQCH-GSPHGWLITLGLDLQIHLVNPLSRARIQ 762
             +++S R F +  T K  +L LPEA  R+ H GS HGWLI L     I ++NPL+R +I 
Sbjct: 61   SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIH 120

Query: 761  LPPQSTFPH-----------QY--------EEGCSPEKLRRVFIRKAIXXXXXXXSTFPE 639
            LP  S+FP+           +Y            S  ++R  FI+K +           +
Sbjct: 121  LPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKK-GD 179

Query: 638  DGIVLAIYSATDKLAFARPSDATWNPLGCPQGAHDDILFFRGQFYAVSAMGELRVCDITS 459
              + +AI  +T  LA+ +  D  WN +   +   +D+++F G FYAV+  G++ VCD+  
Sbjct: 180  FFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG 239

Query: 458  SPPVAREFLSPPRDMDGWARIYLVEMSGDLHMVVRGFEDKEENFLVGRHTNETISFQVYR 279
            + P    F+  PR + G  + YLV  SGD  ++V  + D +  F +     +T  F+V++
Sbjct: 240  NSPKV-SFIETPRQIGGDMQ-YLVS-SGDGLLLVTRYLDLDVEFDI--FIYKTARFEVFK 294

Query: 278  LDFSTKEWTELKSFDHHALFLGCNSSFSIQVSDYPACKGSCIYFADDARP---DGELTYG 108
            LD +   W  + S     LF+G NSS ++  S    C G CIY+ DD      DG +   
Sbjct: 295  LDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIG-E 353

Query: 107  FDAGVFNLKDQTIGPLYADDRNTLS--LFSPPLWITP 3
             D G+F L D +I PL    RN+ S   + PPLWI+P
Sbjct: 354  HDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISP 390