BLASTX nr result

ID: Cimicifuga21_contig00027236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00027236
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313019.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002265593.1| PREDICTED: uncharacterized protein LOC100253...   132   4e-29
emb|CAN80502.1| hypothetical protein VITISV_007231 [Vitis vinifera]   131   5e-29
ref|XP_002306132.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003603990.1| Kinesin-like protein [Medicago truncatula] g...   126   2e-27

>ref|XP_002313019.1| predicted protein [Populus trichocarpa] gi|222849427|gb|EEE86974.1|
            predicted protein [Populus trichocarpa]
          Length = 1000

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/116 (62%), Positives = 85/116 (73%), Gaps = 5/116 (4%)
 Frame = -1

Query: 334  MWVLVAKLKKEGGAISEFNID----DGIDLVTDLKMNNEDSTSVVDLKEMQVSDGTKSVE 167
            MWVLVAKLKK+G AI   N D    DGID   D KMN  +      +KE Q  D ++ V+
Sbjct: 859  MWVLVAKLKKDGSAIPGMNADERHGDGIDHARDPKMNGVEVDQNNAVKERQDLDASQEVD 918

Query: 166  GA-QLDPLVVRLKARMQEMKDKQLESLGTGDSNSHVCKVCFESPTAALLLPCRHFC 2
            G  + +PLVVRLKARMQEMK+K+L+ LG GD+NSHVCKVCFESPTAA+LLPCRHFC
Sbjct: 919  GTPKEEPLVVRLKARMQEMKEKELKYLGNGDANSHVCKVCFESPTAAILLPCRHFC 974


>ref|XP_002265593.1| PREDICTED: uncharacterized protein LOC100253714 [Vitis vinifera]
          Length = 1079

 Score =  132 bits (331), Expect = 4e-29
 Identities = 72/118 (61%), Positives = 88/118 (74%), Gaps = 7/118 (5%)
 Frame = -1

Query: 334  MWVLVAKLKKEGGAISEFNIDDG----IDLVTDL--KMNNEDSTSVVDLKEMQVSDGTKS 173
            MWVLVA+LKKEGGAI E N D+     +D V DL  K+++ DS + V LKEMQV D  + 
Sbjct: 935  MWVLVAQLKKEGGAIPESNTDERHPNELDHVNDLNPKIDDSDSKNTV-LKEMQVPDVMRP 993

Query: 172  VEGA-QLDPLVVRLKARMQEMKDKQLESLGTGDSNSHVCKVCFESPTAALLLPCRHFC 2
                 + +PLV RLKARMQEMK+K+ + LG GD+NSH+CKVCFESPTAA+LLPCRHFC
Sbjct: 994  AHDIPKEEPLVARLKARMQEMKEKEQKYLGNGDANSHICKVCFESPTAAILLPCRHFC 1051


>emb|CAN80502.1| hypothetical protein VITISV_007231 [Vitis vinifera]
          Length = 1082

 Score =  131 bits (330), Expect = 5e-29
 Identities = 72/118 (61%), Positives = 88/118 (74%), Gaps = 7/118 (5%)
 Frame = -1

Query: 334  MWVLVAKLKKEGGAISEFNIDDG----IDLVTDL--KMNNEDSTSVVDLKEMQVSDGTKS 173
            MWVLVA+LKKEGGAI E N D+     +D V DL  K+++ DS + V LKEMQV D  + 
Sbjct: 938  MWVLVAQLKKEGGAIPESNTDERHPNELDHVNDLNPKIDDXDSKNTV-LKEMQVPDVMRP 996

Query: 172  VEGA-QLDPLVVRLKARMQEMKDKQLESLGTGDSNSHVCKVCFESPTAALLLPCRHFC 2
                 + +PLV RLKARMQEMK+K+ + LG GD+NSH+CKVCFESPTAA+LLPCRHFC
Sbjct: 997  AHDIPKEEPLVARLKARMQEMKEKEQKYLGNGDANSHICKVCFESPTAAILLPCRHFC 1054


>ref|XP_002306132.1| predicted protein [Populus trichocarpa] gi|222849096|gb|EEE86643.1|
            predicted protein [Populus trichocarpa]
          Length = 1067

 Score =  130 bits (326), Expect = 1e-28
 Identities = 68/115 (59%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
 Frame = -1

Query: 334  MWVLVAKLKKEGGAISEFNID----DGIDLVTDLKMNNEDSTSVVDLKEMQVSDGTKSVE 167
            MWVLVAKLK+E  AI   N D    DGID  +D K N  +      LKE +  D ++  E
Sbjct: 926  MWVLVAKLKREDSAIFGMNADERHSDGIDHTSDPKTNGVEVDRNSILKEREDLDASQVDE 985

Query: 166  GAQLDPLVVRLKARMQEMKDKQLESLGTGDSNSHVCKVCFESPTAALLLPCRHFC 2
              + +PLVVRLKAR+QEMK+K+L+ LG GD+NSHVCKVCFESPTAA+LLPCRHFC
Sbjct: 986  TPKEEPLVVRLKARIQEMKEKELKQLGNGDANSHVCKVCFESPTAAILLPCRHFC 1040


>ref|XP_003603990.1| Kinesin-like protein [Medicago truncatula]
            gi|355493038|gb|AES74241.1| Kinesin-like protein
            [Medicago truncatula]
          Length = 1197

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/114 (57%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
 Frame = -1

Query: 334  MWVLVAKLKKEGGAISEFNID---DGIDLVTDLKMNNEDSTSVVDLKEMQVSDGTKSVEG 164
            MWVLVAKLKKEGG + E NID   DG + +   + N  +   V   K+  +       E 
Sbjct: 1058 MWVLVAKLKKEGGIVPESNIDKKFDGAENINGQQNNGHECNFV--FKDQHLDLSKPHGEI 1115

Query: 163  AQLDPLVVRLKARMQEMKDKQLESLGTGDSNSHVCKVCFESPTAALLLPCRHFC 2
             + +PLVVRLKARMQEMK+K+L+ LG GD+NSHVCKVCFESPTAA+LLPCRHFC
Sbjct: 1116 PKEEPLVVRLKARMQEMKEKELKYLGNGDANSHVCKVCFESPTAAILLPCRHFC 1169


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